Methanomethylovorans hollandica: Metho_1921
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Entry
Metho_1921 CDS
T02418
Name
(GenBank) DNA-directed RNA polymerase, subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Metho_1921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhz03021
]
Metho_1921
Enzymes [BR:
mhz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Metho_1921
Transcription machinery [BR:
mhz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Metho_1921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
AGB50097
UniProt:
L0KXB3
LinkDB
All DBs
Position
1916715..1917857
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AA seq
380 aa
AA seq
DB search
MALIESTIDSMLSNLDLPLNILQTIKEDVIKAGVNKKELEEIIEKVKESYEYAKVEPCEA
VGVVSAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKEPSTPTMTISVLEE
YAQDRDKVRKLAWEIEATHIDQLADVTTDLLNMQLIIDLHEKTLNHRSISVDELIEKLSD
KLDVQVRLSENIENQLIVNPKEPSYRELLQMAKNINSITLKGIEGVKRVVIRKDSDEYML
YTEGSQLKKVLEVEGVDISRTYTNNISEIYDVFGIEAARNAIIKEATSTLGEQGLTVDIR
HIMLVSDIMCCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDIDELNGVTE
NIIVGQPIKLGTGDVHLVAK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctttgatcgaatctacgatagattcaatgcttagtaaccttgacctgcctttgaac
atcctccagacaattaaagaagatgtaattaaagcaggagtcaacaaaaaggagcttgag
gagatcatcgagaaggttaaggaaagttacgagtatgcaaaagtagaaccttgcgaagct
gtgggagtggtatcagcccagtcaataggagaaccgggcactcagatgacgatgcgtact
ttccactacgccggtgtggctgagatcaacgttacattaggacttccccgtcttatagaa
atagttgatgcaagaaaggaaccaagcactccaacaatgacaatatccgttctggaagaa
tatgcacaggacagagataaggtacgaaaactcgcatgggaaatagaggctacacacata
gatcaactagcagatgttaccaccgatctgctgaatatgcagctaataatagaccttcat
gaaaagaccttgaaccatagaagcataagtgtagatgaacttatcgaaaaactgagtgat
aagttggatgtacaggtaagattgtccgaaaacattgagaaccaactcattgtgaaccca
aaagagccttcgtacagagaactcttacagatggcaaagaacattaacagtatcaccttg
aaggggatagaaggagtcaaaagagtggtgatacgcaaggatagtgacgaatatatgctc
tacaccgaaggttcccagctgaagaaagtgttggaggtggaaggtgtagacataagtcgt
acctatacaaacaacattagtgagatatacgatgtattcgggatagaggctgcaaggaat
gctattatcaaggaagctaccagtacgttgggagaacagggtcttacagtggatatcaga
cacataatgctggtttctgatatcatgtgctgtgatggtgaagtcaagcagataggccgt
catggtatttcaggtgaaaaggctagtgtatttgcacgtgctgcttttgaggtaactgtg
aaccatctgcttgatgcaggaatgcgcggcgatattgatgagctaaatggtgtcacagag
aacattatagtaggacagcctattaaacttggaactggagatgtacacctggtagctaaa
taa
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