Methanomethylovorans hollandica: Metho_1976
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Entry
Metho_1976 CDS
T02418
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
mhz
Methanomethylovorans hollandica
Pathway
mhz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Metho_1976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_1976
Enzymes [BR:
mhz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Metho_1976
DNA repair and recombination proteins [BR:
mhz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Metho_1976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
ABC_tran_CTD
Phage_TAC_11
DUF2524
bZIP_1
Motif
Other DBs
NCBI-ProteinID:
AGB50148
UniProt:
L0L171
LinkDB
All DBs
Position
complement(1972367..1972639)
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AA seq
90 aa
AA seq
DB search
MAGRRKKMDASPNEESIGESLSFETALEKLEGLVEKLEKGNLTLDESLETFEQGMKFARV
CSQKLSKAERKIEQLVLEDGELRAKPFSEG
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtaggaggaaaaagatggatgcaagtcctaatgaagaaagtataggtgaaagt
ttaagttttgaaactgctcttgaaaagctggaagggctggtggaaaaacttgaaaagggc
aatctcaccctcgatgaaagccttgaaacatttgagcagggcatgaagtttgcccgtgtc
tgcagccagaaactttcaaaggctgaaagaaagatcgaacaactggttctggaggatggg
gagctgagggcaaagcctttcagtgaagggtaa
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