Methanomethylovorans hollandica: Metho_1998
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Entry
Metho_1998 CDS
T02418
Name
(GenBank) rRNA pseudouridine synthase, putative
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mhz
Methanomethylovorans hollandica
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhz03016
]
Metho_1998
Enzymes [BR:
mhz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Metho_1998
Transfer RNA biogenesis [BR:
mhz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metho_1998
Prokaryotic type
Metho_1998
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Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AGB50167
UniProt:
L0KXH6
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Position
complement(1994854..1995873)
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AA seq
339 aa
AA seq
DB search
MKAPDPSYFLDSDHIELIHKNKSSTDVIYGCSPYMRSIDKHLLMGVVNLNKPSGPTSHEV
TAWVKSILEIEKAGHSGSLDPGVTGLLPLMLGKATKTVSALRLSGKEYICLMRLHDTLPE
KVVKKVCAEFNGPIYQMPPVISAVKRSIRVRNIYYLDVLEIDGPMVLMKVGCEAGTYIRK
LCHDIGLALGCGANMQQLIRTRTGPFTGDTAVTLQELKDAFVLWKEGCSEDELRRVVRPM
EEGLAHLPRIIVRDSAVDALCHGASLAVPGIVSLDPGIKHEQQVCIFTLKGEAVAIATAK
MDTAGIMDASNGLAAYTERVIMDVDVYPKCWHRRNAEVV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagctcctgatccttcttattttttggatagcgatcatatcgaacttatccataag
aataaatcatctactgatgttatttatggttgttctccttatatgcggtccatagacaaa
catctacttatgggtgtggtcaacctgaataaaccaagtggtcctaccagtcatgaggtc
actgcatgggtcaaatccattcttgaaatcgagaaagctggtcattccggttctttggat
cccggtgtaactggtttacttcctctaatgctaggtaaagccactaagaccgtttctgca
cttcgtctttcaggaaaggaatacatatgtctcatgcggttgcatgatacacttccagaa
aaggttgtgaagaaggtctgtgctgagttcaatggtcctatttatcagatgcctccagtg
atatcagcagtaaaaaggtccatacgtgtaagaaatatttattatcttgatgtgcttgag
atagatggcccaatggttttaatgaaagttgggtgcgaagctggtacttatatcagaaag
ctctgtcacgatattggtctggccttaggctgtggagcaaatatgcaacagctcattaga
acacgcacaggaccttttactggggacaccgcggtaacattgcaggaattgaaagatgct
tttgttctgtggaaagaaggatgttctgaggatgaactgcgcagggtagtaaggcctatg
gaagaaggtttagcacacctcccacggattatagtccgcgacagtgctgtggatgctctc
tgccacggtgcttctcttgcggtgcctggaatagtaagtcttgatcctggaataaagcat
gagcagcaggtatgtatctttactttgaaaggtgaagcagtagcaatagctacggcaaag
atggacactgccggtatcatggatgccagcaatggattggccgcatataccgaaagagta
ataatggatgtagatgtttaccctaaatgctggcacaggcgaaatgccgaggtagtctag
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