Methanomethylovorans hollandica: Metho_2108
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Entry
Metho_2108 CDS
T02418
Name
(GenBank) DNA repair and recombination protein RadB
KO
K04484
DNA repair protein RadB
Organism
mhz
Methanomethylovorans hollandica
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_2108
DNA repair and recombination proteins [BR:
mhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Metho_2108
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
RecA
SRP54
Zot
AAA_24
TrwB_AAD_bind
DUF87
DnaB_C
CbiA
nSTAND3
AAA_31
PhoH
ATPase_2
CLP1_P
AAA_22
KdpD
ABC_tran
CobA_CobO_BtuR
ArsA_ATPase
IstB_IS21
AAA_30
G1RFP
MeaB
DUF815
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AGB50273
UniProt:
L0L1K0
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Position
complement(2093531..2094184)
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AA seq
217 aa
AA seq
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MSGCKSVDDLLAGGLEAGVVTQFFGEAGSGKTNLCLQLAIRCVEQGKKVIIIDTEGISPS
RFRQIAGDRAKEIAQQIIIYEPHNFEEQHAAVRELEKVIKENIGLIIVDSATAFYRFELE
QDDSAMRARRELGSQIGFLHSLARKYGISVVITNQVYTDITSGTLRPVGGNIIEHISKTI
IQLERVGDGKRRAVLRKHRSLPEGISCEFTITSEGVE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctgcaaatcagttgatgatctccttgcaggagggctagaagccggagttgtt
actcagttttttggagaagctggcagcggcaaaacaaatctgtgtcttcagcttgccata
agatgtgttgagcaaggaaaaaaggtcattatcattgatacagaaggtatttctcccagt
aggttccggcagatagcaggagaccgggcaaaggaaatagctcagcagataataatctat
gaaccccataactttgaagagcagcatgcggcagtaagagaacttgaaaaggtcataaag
gagaacattggtcttatcattgttgactctgctacagccttctacagatttgaactggag
caggacgattctgctatgcgggcaagacgcgaacttggcagtcagataggttttctgcac
agccttgcaagaaaatatggcatatctgtagtcatcaccaatcaggtatacacggatatt
acctcaggcacgctgaggcccgttggagggaatatcatcgagcatatatccaagaccatt
atccagttagaacgcgttggcgatggaaaaaggcgggcagttctcaggaaacatcgttcc
cttccggaaggtataagctgtgagttcacaataacttctgaaggggttgaatga
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