Methanomethylovorans hollandica: Metho_2508
Help
Entry
Metho_2508 CDS
T02418
Name
(GenBank) topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhz
Methanomethylovorans hollandica
Brite
KEGG Orthology (KO) [BR:
mhz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhz03032
]
Metho_2508
03400 DNA repair and recombination proteins [BR:
mhz03400
]
Metho_2508
Enzymes [BR:
mhz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Metho_2508
DNA replication proteins [BR:
mhz03032
]
Prokaryotic type
DNA Topoisomerases
Metho_2508
DNA repair and recombination proteins [BR:
mhz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Metho_2508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AGB50648
UniProt:
L0L2K0
LinkDB
All DBs
Position
pMETHO01:complement(45353..47500)
Genome browser
AA seq
715 aa
AA seq
DB search
MRTIAILTTKHAYATQITQALGEDSYTYNVRGIPVIEIKWNNTLYKITYFSGHLMDYSYV
FPQKKDIKYTDFLSRPIKMQDKESEATYLLESVIPKSDLVIVATENTPEGDCIAVEVAKL
VSKMKYSIPVKRMRCNTFSYRDIKRNLFNPESIEQSKADSYNVLMMLEHIYQNVLTYQLS
NYLSKKTRDHIGYFVIDTCQIPLLNLILEHEEAIEKERINEKWSIFGKIDIGNKIGVVIE
PIENVFSSKQEASGRMKKIKSINTVATVQHIENRIIRIAPPKPLNFASLMTECGKHLDIS
TNEIINVLQELYKLGYISYPFTNEQEYPIDFDFLSPLKEWTLFKKRFTTICEKILENGST
YRGTSSRKTTPIYPCRPLAMQHDKDKKMQGVFSIIFRHYAGLLSGPFEIEQQKISFSVGN
ENFYCINGTILNNGWTGTYIFDLIELRSPLNCVPGDQFPLKKIGMSKIKPQLQPFSYFDI
YTHAHKESSGFNTTKIIENCIRRGFLSRSQKNLKTTSLGKEIVKLFQKNVPIITSFNIRN
SFNLLSLDVLSSKKTFDDAINQGIHLIELVSKSIILNENKIQENLEKILISPEFQIVGQC
PKCKKALTVKQYTDPDGELRRFVGCYGYPECKNILSIPKVGTLEIVGLCPESNLPMFIVH
TEKRDYKWGLGKGPCFQCKNENCQEQKKETKSRIIYTPNIDKEIELVSSLVEENS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactatagccatattaactactaaacatgcttatgcaactcaaattacccaagca
ttgggagaggattcttacacatacaacgtgagaggaatacctgtaatcgagattaagtgg
aataatactctttacaaaataacttattttagtggtcatcttatggattatagctatgtg
tttccgcaaaaaaaagatattaaatatacagatttcctatcacgtccaataaaaatgcaa
gataaggaaagtgaagcaacatacttattggaatcagttattccaaaatcagatttagtg
attgttgccaccgaaaatactccagaaggcgattgcattgctgtagaggtagcaaaactc
gtctctaaaatgaaatattcgattcctgtcaaaagaatgagatgcaacacattctcatac
agagatattaaaagaaatttatttaatcctgaatcaattgaacaatcaaaagccgatagt
tacaatgtcctgatgatgcttgaacacatatatcaaaacgtactcacttatcaattatcc
aactatctttcaaaaaagacaagagatcatatcggatactttgtgattgatacttgtcaa
atacctttattaaatttgatccttgaacacgaagaagccattgaaaaagagaggataaac
gaaaagtggagcatttttggtaaaattgatattggaaataaaataggagtagttattgag
ccaatagaaaacgtatttagttcaaaacaagaagctagtggacggatgaaaaaaatcaaa
agcataaatactgttgcaacagtacagcatattgaaaatagaataataagaatagctcct
cccaaacccctgaattttgcatctttgatgacagaatgcggtaaacatttagatatatct
acaaatgaaataattaatgttttacaagaactatataaactcggttacatatcatatcct
tttacgaatgaacaagaatatcctatagattttgattttttgtctcctttgaaagaatgg
acgctttttaaaaagagatttactacgatctgtgaaaagattctcgaaaatggaagcact
tacagagggactagttcaagaaaaacaactccaatatacccctgcaggccacttgcaatg
caacacgataaagataagaagatgcaaggtgtattttcaataatattcaggcactatgct
ggccttctttccggaccatttgaaatcgaacaacaaaaaatcagtttttcggtaggaaat
gagaatttttattgtattaatggaacaatcctgaataatgggtggacagggacatatatt
tttgacctgattgaactaagatctcctctaaattgtgtacctggtgatcagttcccatta
aaaaaaattggaatgagcaaaataaaaccacagcttcagccgttctcctattttgacata
tatacacatgctcataaagaaagttctggatttaatactacaaaaataattgaaaattgt
atcagaagaggttttttatctcgatctcagaaaaatctaaagacaacatcccttggtaaa
gagattgtaaaactcttccaaaaaaatgttccaataataacttcattcaatatcaggaat
tcatttaatttactttcacttgatgtactttcaagtaaaaaaacatttgatgatgcaatt
aatcaaggaattcatttgatagaattggtttcaaaatcaattatattaaacgaaaataaa
attcaagaaaatcttgagaagatactgattagtccagagttccagatcgtaggccaatgc
ccaaaatgtaaaaaagcacttaccgttaagcaatatactgacccagatggagaactccgt
agattcgtaggttgttatggatatcctgaatgtaaaaatattctatcaattcctaaagtt
ggaacgttggaaattgtaggtttgtgtcctgaatcgaacttgccaatgttcattgtacat
acagaaaaaagagattataaatggggattaggaaaaggaccatgcttccagtgtaagaat
gaaaattgtcaagaacaaaaaaaagagacaaaaagcaggattatttacacgccaaatatt
gacaaagaaatagaattggtttcttctcttgtagaagaaaacagctaa
DBGET
integrated database retrieval system
