Mycobacterium intracellulare ATCC 13950: OCU_00060
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Entry
OCU_00060 CDS
T02158
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mia03032
]
OCU_00060
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_00060
Enzymes [BR:
mia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OCU_00060
DNA replication proteins [BR:
mia03032
]
Prokaryotic type
DNA Topoisomerases
OCU_00060
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OCU_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
LAMB1
Motif
Other DBs
NCBI-ProteinID:
AFC41226
UniProt:
H8IHK0
LinkDB
All DBs
Position
7331..11107
Genome browser
AA seq
1258 aa
AA seq
DB search
MTDTTLPPGDDSVDRIQPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
YDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYCVTADALVRLPFGQSVRIGDVVPGAKPNTDNVTDLKVLDRHGNPVLADRL
FHSGDHQTYTVRTAEGYEVTGTANHPLLCLVDVGGVPTLLWRLIEEIRPDDCVVMQRTPP
TELGPADWEPTMEALLLGAFISEGFVSEARAGFNNLDRDFFNTVVTAYDAVVGGTRYVSE
RTIASGSLLYELDIHNVNALRGSRLWDVVGQRSADKAVPEWLWQAPACVKRAFLQALFEG
DGSCSVLPRNTIQISYSTRSERLAKDVQQMLLEFGVVSRRYRHAVGEHKVVITNRAQAEL
FAAQIGFGGAKQAKLTRILGAMPPCAGMDGDHVPGLGRFVRRHSGSRWVDKDWLNRHNVD
RIQRWRTRGAEILSHIADPDVRAIATELTDGRFYYAKVASVTEAGVQPVYSLRVDTEDHA
FLTNGFVSHNTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSG
GIAVGMATNIPPHNLRELAEAVYWCLDNHEADEEATLTAVCERVKGPDFPTHGLIVGSQG
IHDAYTTGRGSIRMRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGI
SNIEDQSSDRVGLRIVVEIKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLRLD
QMIRHYVAHQLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARA
GLIELLDIDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRRIV
HDELSEIVDKHGDERRTRIIAADGDVNDEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVQGAGLKQDDIVRHFFVCSTHDWILFFTTQGRVYRAKAYELPEASRTARGQHVANL
LAFQPEERIAQVIQIRGYEDAPYLVLATRNGLVKKTKLTDFDSNRSGGIVAINLRDNDEL
VGAVLCSSDEDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNADDYLLSLNVVRE
GTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDEDSELYAITS
GGGVIRTAAGQVRKAGRQTKGVRLMNLGEENTLLAIARNAEANADEAVEEVEGAESES
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccacgctgccgccaggtgacgactccgtcgaccggatccagccggtcgac
attcagcaggagatgcagcgcagctacatcgattacgcgatgagcgtcatcgtgggccgc
gcgctgcccgaggtgcgtgatggcctcaagccggtgcaccgccgggtgctctatgcgatg
tatgactccggcttccggccggaccgcagccacgcgaagtcggcacggtcggtcgccgag
acgatgggtaactaccacccacacggcgacgcctcgatctacgacaccctggtgcggatg
gcgcagccgtggtcgctgcgctatcccctggtcgacgggcagggcaacttcggttcgccc
ggcaacgacccgccggcggccatgaggtattgcgtcacggcggatgcattggtgcggttg
ccgttcgggcaatccgtgcggatcggcgacgtcgtcccgggcgcgaagccgaatacggac
aacgtgaccgacctgaaagttctcgatcggcacggtaacccggttctggcggatcgcttg
ttccattcgggcgaccatcagacctacaccgtgcgcaccgccgaaggctacgaggtcacc
ggcaccgcaaaccacccgttgctgtgcctagtcgacgtcggtggcgtaccgaccctgtta
tggaggctgatcgaagagatccggcccgacgactgcgtcgtgatgcagcgcactccccca
acggaactcggtcccgccgactgggagccgacgatggaggccttgctcctcggggcattt
atcagtgaaggcttcgtatccgaagcgcgcgccggtttcaacaacctcgatcgcgacttc
ttcaacacggtggtcaccgcgtatgacgcggtcgtgggcggcacccgctacgtgtccgaa
cggacgattgcgtcgggatcgttgctgtacgagctcgatatccacaatgtcaacgccctg
cggggtagccgtctttgggatgtcgtcggacagcgttcagcggacaaggctgtaccggaa
tggctttggcaggcgccggcttgcgtcaagcgcgcattcctgcaggcgctgttcgaaggc
gacgggtcgtgctccgtcctgccccgcaacacgattcagatctcgtactcgacgcgcagc
gagcggctggcgaaagacgtccagcagatgctgctcgagttcggcgtcgtttcgcgccgc
taccggcacgccgtcggggagcacaaggtcgtcatcaccaaccgtgcacaggccgaactg
ttcgccgcgcaaatcggtttcggcggtgcgaaacaagcgaagctgaccaggattctgggc
gcgatgccgccgtgtgccggaatggacggcgaccacgttcccggcctgggacggttcgtc
cgccgacactccggcagccgctgggtcgacaaggactggctgaaccgccacaacgtcgac
cgcatccagcggtggcgcacacggggcgcggagatcctttcgcacattgccgacccggat
gtccgcgcaatcgcaacggaactcaccgacggacgcttctattacgcgaaggtcgcctct
gtcaccgaggccggcgtccaaccggtgtacagccttcgcgtcgacaccgaggaccatgcg
ttcctcaccaacggtttcgtcagccacaacaccgaggcgcggctgaccccgctcgcgatg
gagatgctgcgcgaaatcgacgaggagacagtcgatttcatccccaactacgacggacgg
gtgcaggagcccaccgtcctgcccagccggttcccgaacctgctcgccaacggttccggc
ggcatcgcggtcgggatggcgaccaacatcccgccgcacaacctgcgcgagctggccgag
gccgtctactggtgcctggacaatcacgaggccgacgaagaggccaccctcaccgcggtc
tgcgaacgggtcaagggccccgacttccccacccacggcctgatcgtcgggtcacagggc
atccacgacgcgtacaccaccggacgcggctcgatccggatgcgcggagtcgttgaggtg
gaagaggattcacgcggacgcacctcgctggtcatcaccgagctgccgtaccaggtgaac
cacgacaacttcatcacctcgatcgccgaacaggtccgcgacggcaagctggccggcatc
tccaacatcgaggaccagtccagcgaccgggtcggcttacgcatcgtcgtggagatcaag
cgcgacgccgtcgccaaagtggtgctgaacaacctctacaagcacacccagctgcagacc
agcttcggcgcgaacatgctgtcgatcgtcgacggggtgccgcgcacgctgcgcctcgac
cagatgattcgccactacgtggcgcatcaactcgacgtcatcgtgcggcgcaccacctac
cggttgcgcaaggccaacgagcgtgcgcacatcttgcgcggtctggtcaaagcgctcgac
gcgctcgacgaggtcatcgccttgatccgcgcgtcggagaccgtggacatcgcacgggcc
gggctgatcgagctgctggatatcgacgaaatccaggcgcaggcgatcctggacatgcag
ctacgccgcctggccgccctggagcgccagcgcatcatcgacgacctggccaagatcgag
gccgagatcgccgacctcgaggacatcctggccaagcccgagcggcagcgccggatcgtg
cacgacgagctgtccgagatcgtcgacaaacacggcgacgagcggcgcacccggatcatc
gccgccgatggggacgtgaacgacgaggacttgatcgctcgcgaggacgtcgtcgtcacc
atcaccgagaccggctacgccaagcgcaccaaaaccgacctgtaccgcagccagaaacgc
ggcggcaagggcgtccagggcgccgggctcaagcaggacgacatcgtgcggcacttcttc
gtgtgctcgacgcacgactggatcctgttcttcaccacgcagggccgggtctaccgcgcc
aaggcctacgaactgccggaggcgtcccgcaccgcgcgcggtcagcacgtcgccaacctg
ctggcgttccagcccgaggagcggatcgcccaggtcatccagatccgcggctatgaggat
gcgccgtacctggtgctggccacccgcaacggcctggtgaagaagaccaagctgaccgac
ttcgattccaaccggtcgggtggaatcgtggcgatcaacctgcgcgacaacgacgagctg
gtcggcgcggtgttgtgctcctccgacgaggacctgctgctggtatcggccaacggccag
tccatcaggttctcggcgaccgacgaagcgctgcgcccgatggggcgcgccacctccggc
gtgcagggcatgcgcttcaacgccgacgattatctgttgtcgctcaacgtcgttcgtgag
ggcacctacctgctggtggcgacctccggcgggtacgccaagcgcaccgcgatcgaggag
tacccggtgcagggccgcggcggcaagggcgtcttgacggtgatgtatgaccggcggcgt
ggccggctggtcggcgcgttgatcgtcgacgaggacagcgagctgtacgcgatcacctcg
ggaggcggcgtcatccggaccgcggccggccaggtccgcaaggcgggacggcagaccaag
ggtgtgcggctgatgaacctgggcgaggaaaacaccctgttggccatcgcccgcaatgcc
gaagcgaacgcggacgaagccgtcgaggaggtcgagggcgccgagtcggagagctag
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integrated database retrieval system
