Mycobacterium intracellulare ATCC 13950: OCU_09420
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Entry
OCU_09420 CDS
T02158
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03420
Nucleotide excision repair
mia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OCU_09420
03430 Mismatch repair
OCU_09420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_09420
Enzymes [BR:
mia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCU_09420
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OCU_09420
MMR (mismatch excision repair)
Other MMR factors
OCU_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFC42162
UniProt:
H8ITK7
LinkDB
All DBs
Position
927475..929817
Genome browser
AA seq
780 aa
AA seq
DB search
MSVHATDTKPASEADQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAA
RGVGVGQVLAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIEGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPADAVSKLNDDSD
ELSRTVASVYGEYQRRLRAANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLVDEYQD
TNHAQYVLVRELVGRGGTEAPASSDDVPPAELCVVGDADQSIYAFRGATIRNIEDFERDY
PDATTILLEQNYRSTQNILSAANSVIARNSGRRDKRLWTAEGAGELIVGYVADNEHDEAR
FVAEEIDALADKGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRD
IVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAAEGKVP
MLNSRAEKAIAGFVELLDELRGRLDDDLGDLVESVLERTGYRRELESSSDPQELARLDNL
NELVSVAHEFSTDRANADALDESLHTPEDEDVPDTGVLAEFLERVSLVSDSDEIPEDGAG
MVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPTELSEERRLAYVGITRARRRLYL
SRAIVRSSWGQPMLNPESRFLREIPQELIDWRRTAPAPSFSAPVSGAGRFGPPRAAPTRS
GMSKRPLLVLEPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPISKL
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgcaacagataccaagccggcctcggaagccgatcaactgctcgagggg
ctcaacccgcaacagcgccaggcggtggtgcacgagggctccccgctgctgatcgtcgcc
ggggcgggttcgggcaagaccgctgtgttgacgcgtcgcatcgcctacctgatcgcggcc
cgcggcgtgggggtaggccaggtgctggcgatcaccttcaccaacaaggccgcggccgag
atgcgggagcgggtggtgcggctggtcggtaaccgggcccgcgccatgtgggtgtccacc
tttcactcgacctgcgtgcgcatcctgcgcaaccaggcgtccctgatcgaaggcctcaac
tccaacttttcgatctacgacgccgacgattcgcggcggctgttgcagatgatcgggcgc
gacatgggcctcgacatcaagcgctactcgccgcggctgttggccaacgccatctccaac
ctgaagaacgagctgatcgaccccgccgacgcggtctccaagctgaacgacgattccgac
gagttgtcgcgcacggtggcgagcgtctacggcgagtatcagcgccggttgcgggcggcg
aacgcgctggacttcgacgacctgatcggggaaaccgtggcggtgttgcgggctttcccg
cagatcgcccagcattaccggcggcggttccggcatgtgctcgtcgacgagtaccaggac
accaaccacgcccagtacgtgctggtgcgggaactggtgggccgcggcggcacagaagca
ccggcatcgtccgacgatgtgccgcccgccgagttgtgcgtggtcggcgacgccgaccag
tcgatctatgcattccgcggcgccaccatccgcaacatcgaggacttcgaacgcgactac
cccgacgcgacaaccattctgctggaacagaattaccggtcgacgcagaacattttgtcg
gcggccaactccgtgatcgcccgcaattccgggcgccgggacaaacgcctgtggaccgcc
gaaggcgccggcgaattgatcgtcggctacgtcgccgacaacgagcacgacgaggcaaga
ttcgtcgccgaggagatcgacgcgctcgccgacaagggcgagatcacctacaacgacgtc
gccgtcttctatcgcaccaacaactcgtcgcggtcgttggaagaggtcttcatccgcgcc
gggattccgtacaaagtcgttgggggagtgcggttttacgagcgcaaggagattcgcgac
attgtcgcctatctgcgggtgctggacaaccccggggatgcggtcagcatgcggcgcatc
ctcaataccccgcgacggggcatcggagatcgcgccgaggcctgcgtggcggtgtacgcc
gagaacaccggggccagcttcgccgacgcactcgtcgccgcggccgaaggcaaagtgccg
atgctgaattcccgcgcggagaaggcgatcgcgggtttcgtcgagcttctcgacgagctg
cgcggccgcttggatgacgatctcggggatctcgtcgagtcggtgctcgaacgcactggg
taccgcagggagctggaatcctccagcgatccccaggaactggcgcggttggacaacctc
aacgaactcgtcagtgtcgcacacgaattcagcaccgaccgggcgaacgccgacgcgctg
gacgagtcgctgcacacgcccgaagacgaggacgtgccggataccggtgtgctggcggag
ttcttggaaagggtgtcgctggtttccgacagcgacgaaatccccgaggacggcgccggc
atggtcacgctgatgaccctgcacaccgcgaaaggcctcgagtttccggtggtgttcgtc
accgggtgggaggacgggatgttcccccacatgcggtcattggacgacccgaccgaactg
tccgaggagcggcggctggcctacgtgggcatcacccgggcccgccggcggctgtacctg
agcagggccatcgtccgctcctcctgggggcagcccatgctcaacccggaatcccgtttc
ttgcgggagattccgcaagaactgatcgattggcgccgcaccgcgccggcgccgtcgttc
agcgcgccggtgagcggcgccggacgattcggcccgccgcgcgcggcgcccactcgttcc
gggatgagcaaacgaccgctgctggtgctcgaacccggcgaccgggtgacccacgacaag
tacggcctgggacgggtcgaagaagtttccggcgtcggcgaatcggcgatgtcgctgatc
gacttcggcagctcgggacgggtcaagctgatgcacaaccacgccccgatcagcaagctc
taa
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