Mycobacterium intracellulare ATCC 13950: OCU_20270
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Entry
OCU_20270 CDS
T02158
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCU_20270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_20270
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OCU_20270
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OCU_20270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AFC43246
UniProt:
H8IT06
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All DBs
Position
2108201..2108971
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AA seq
256 aa
AA seq
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MLRQHKLGEADRIVTLLTRDHGLVRAVAKGVRRTRSKFGARLEPFAHIDAQLHPGRNLDI
VTQVVSIDAFATDIVSDYGRYTCGCAMLETAERLAGEERAPAPALHGLTVSALRAVADGR
RSRGLLLDAYLLRAMGIAGWAPALNECARCATPGPHRAFHVGAGGSVCTHCRPAGSTTPP
PGVLDLMSALHDGDWDFAEKTPQSHRNYVSGLVAAHLQWHLERQLKTLPLVERTYHVDRT
IADQRATLIGQDMDCG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgccagcacaagctcggcgaagccgaccggatcgtcaccctgctgacccgtgat
cacgggctggtccgcgcggtggccaagggcgttcgtcgtacccgcagcaaattcggtgcg
cggctggagccattcgcgcacatcgacgcgcaactgcatcccggccgcaacctcgacatc
gtcacccaggtcgtctcgatcgacgcgttcgccaccgacatcgtcagcgactacggccgc
tacacctgcgggtgcgccatgctggaaaccgccgaacgcctcgccggtgaggagcgggcg
cccgccccggccctgcacgggctcacggtgagcgccttgcgggcggtggccgacggccgc
cggtcccggggcctgctgctggacgcctacctgctgcgggcgatgggcatcgccggttgg
gcgccggcgctgaacgagtgcgcccgttgcgccacgcccggtccccatcgtgcgtttcat
gtcggcgcgggcggcagcgtctgcacccactgccgcccggccggttcgacgacgccgccg
ccgggggtgctggacctgatgtcggcgctgcacgacggcgattgggacttcgccgagaag
acgccgcagtcgcaccgcaactacgtcagcggtctggtggcggcgcacctgcaatggcat
ttggagcggcagctcaagacgttgccgctcgtcgaacggacgtatcacgtcgaccgcacc
atcgccgatcagcgcgcgacgctgatcgggcaggatatggactgtggctaa
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