Mycobacterium intracellulare ATCC 13950: OCU_22700
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Entry
OCU_22700 CDS
T02158
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03030
DNA replication
mia03430
Mismatch repair
mia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCU_22700
03430 Mismatch repair
OCU_22700
03440 Homologous recombination
OCU_22700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mia03032
]
OCU_22700
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_22700
Enzymes [BR:
mia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCU_22700
DNA replication proteins [BR:
mia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCU_22700
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCU_22700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AFC43489
UniProt:
H8IVS1
LinkDB
All DBs
Position
complement(2361567..2363429)
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AA seq
620 aa
AA seq
DB search
MGSPFTPDELSLRDTTFVVVDLETTGGRTKSAAGTEPDAITEIGAVKVRGGVVLGEFATL
IDPQRSIPPQVVRLTGITTAMVSDAPTIDAVLPMFLEFARLDQGAVLVAHNAGFDIGFVR
AAAQRCDIAWPRPQVLCTVRLARRVLSREEAPSVRLASLARLFAVTTQPTHRALDDARAT
VDVLHALIERVGNQGVHTYADLRSYLPDVAPAQRRKRVLADGLPHRPGVYLFRGPSDEVL
YIGTAVDLRRRVLQYFTGADPRGRMKEMVTLACAVDHVECAHALEAGVRELRLLAAHAPP
YNRRSRFPQRWWWVALTDEAFPRLAVVRAPRHDRAVGPFQARADAADTAALLSRFTGLRT
CTNRLGRTALHGPLCAEAEVSPCPAARDVTATQYAAAVARMAALVDGADNAALTSAVAQV
AALAERRHFESAARLRDRTAAAVETLWRGQRLRALVALPELVAAAPDGQGGYHLAVIRHG
QLAAAGNAPRGVPPMPVVDAITAGAQAILPAPAPLGGALVEETALIARWLGAPGVRIVRV
QATGDGAGWASPLRSAGGWAAWAEAARSARLAAEQALRDSDLLAEPHPTREQLFGRAGVD
GLAGAGQPVLPRRQPFGATG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgggatcacccttcacgcccgacgaactctcgttgcgcgacaccaccttcgtcgtggtg
gacctcgagaccaccggcggacgcaccaaatccgccgcgggaaccgagccggacgccatc
accgaaatcggggcggtcaaggtgcgcggcggcgtggtgctcggcgagttcgccacgctg
atcgatccgcagcgcagcatcccgccccaggtcgtgcggctgaccggcatcaccacggcc
atggtgtccgacgcgccgaccatcgacgccgtgctgccgatgtttttggagttcgcccgc
ttggatcagggggccgtgctggtcgcgcacaacgccggtttcgacatcggcttcgtgcgg
gccgccgcgcagcggtgcgacatcgcctggccgcggccgcaggtgctgtgcacggtgcgg
ttggcccgccgggtgctcagccgcgaggaggcgcccagcgtgcggctggcgtcgctggcg
cggctgttcgccgtcaccacccagcccacccaccgcgccctcgacgacgcacgcgccacc
gtcgacgtgctgcacgccctcatcgaacgcgtgggcaaccagggcgtgcacacctacgcc
gacctgcgctcctatctgcccgacgtggcaccggcccagcgccgcaaacgcgtgctcgcc
gacgggctcccgcaccgcccgggtgtctatttgttccgcgggccgtcggacgaggtgctc
tacatcggcaccgcggtcgacctgcggcggcgggtcttgcagtacttcaccggcgccgat
ccgcgcggccgcatgaaggagatggtcacgctggcctgcgcggtcgaccatgtcgagtgc
gcccacgcgctggaggccggtgtgcgcgagctgcggctgctggccgcgcacgccccgccg
tacaaccggcgatcccggttcccgcagcgctggtggtgggtggcgctgaccgacgaggcc
ttcccccgcctggcggtggtgcgcgccccgcgccacgaccgcgccgtcggcccgttccag
gcgcgcgccgacgccgccgacaccgccgccctgctgtcccgcttcaccgggctgcgcacc
tgcacgaaccggttggggcgcacggcattacacggaccgctgtgcgccgaggcggaggtc
tcaccgtgcccggccgcccgcgacgtcaccgccacccaatacgccgcggccgtcgcgcgc
atggcggcgttggtcgacggcgcggacaacgccgccctgacgtccgccgtggcccaggtc
gccgccctcgccgagcggcgtcacttcgagagcgccgcgcggctgcgcgaccgcaccgcc
gccgcggtcgagacgctgtggcgcggtcagcggctgcgtgccctggtcgccctgcccgag
ctggtcgccgccgcgcccgacggccagggcggctatcacctcgccgtcatccgccacggc
caactcgccgccgcgggcaacgccccaaggggggtgccgccgatgccggtcgtcgacgcg
attaccgctggggcacaagcgattctgcccgcgccggccccgctgggcggggcgctggtc
gaggagaccgcgctgatcgcgcgctggctgggcgctcccggcgtgcgcatcgttcgggtc
caggcaaccggggacggcgcgggctgggcgtccccgctgcgatcggccggcgggtgggcg
gcgtgggcggaggcggcccgctcggcgcggctggccgccgagcaagccctgcgcgattca
gacctgctggccgaaccgcacccaacgcgcgagcagctgttcggccgcgccggagtcgat
ggccttgccggcgcgggccaacccgtcctcccacgccggcagccattcggcgcgactgga
taa
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