Mycobacterium intracellulare ATCC 13950: OCU_30610
Help
Entry
OCU_30610 CDS
T02158
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03030
DNA replication
mia03430
Mismatch repair
mia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OCU_30610
03430 Mismatch repair
OCU_30610
03440 Homologous recombination
OCU_30610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mia03032
]
OCU_30610
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_30610
Enzymes [BR:
mia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OCU_30610
DNA replication proteins [BR:
mia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OCU_30610
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OCU_30610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
AFC44280
UniProt:
H8IRF9
LinkDB
All DBs
Position
complement(3255049..3258582)
Genome browser
AA seq
1177 aa
AA seq
DB search
MNHSSFVHLHNHTEYSMLDGAAKIAPMLAEVDRLQMPAVGMTDHGNMFGASEFYNAATKA
GIKPIIGVEAYIAPASRFDTRRILWGDPGQKSDDVSGSGSYTHMTMVAETPTGLRNLFKL
SSLASFEGQLGKWSRMDAEIIAEHAEGIIATTGCPSGEVQTRLRLGHDREALESAAKWRE
IFGADNYFLELMDHGLSIEQRVRDGLLEIGRKLGIPPLATNDCHYVTRDAAHNHEALLCV
QTGKTLSDPNRFKFDGDGYYLKSAAEMRRIWDDEVPGACDSTLLIAERVQPYDEVWAPRD
RMPIFPVPEGHDQASWLHHEVMAGLARRFPSGVGQDYIDRAEYEIKVICDKGFPSYFLIV
ADLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMVRYAADKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIADRITKA
LPPPIMAKDIPLSGITDPAHERYKEAAEVRGLIETDPDVRTIYQTARGLEGLIRNAGVHA
CAVIMSSEPLTEAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDALDNI
KANRGIDLDLESVPLDDGPTYELLGRGDTLGVFQLDGGPMRDLLRRMQPTEFNDIVAVLA
LYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLREILSETYGLIVYQEQIMFIAQKV
ASYTMGKADALRKAMGKKKLEVLEAEYKGFYEGMTANGFSEKAVKALWDTILPFAGYAFN
KSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGITVLPPDVN
ESLVNFASVGTDIRFGLGAVRNVGANVVGSLISTRNGKGKFTDFSDYLNKIDIAACNKKV
TESLIKAGAFDSLGHARKGLFLVHTDAVDSVLGTKKAEAIGQFDLFGGDDGCTEAVFTIK
VPDDEWEDKHKLALEREMLGLYVSGHPLNGVAHLLAAQVDTQIPAILDGDVPNETQVRVG
GILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHAYSTYGADIADDTVVLINAKVAIR
DDRISLIANELVVPDFSSAQVNRPIAVSLPTRQCTIDKVSALKQVLARHPGTSQVHLRLI
SGDRITTLELDASLRVTPSPALMGDLKELLGPGCLGG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcgtccttcgtgcacctgcataaccacaccgagtactcgatgttggacggt
gccgcgaagatcgcgccgatgctcgccgaggtggaccggctgcaaatgcccgcggtcggg
atgaccgaccacggaaacatgttcggcgccagcgagttctacaacgcggcgaccaaggcc
gggatcaagccgatcatcggcgtcgaggcctacatcgcgcccgcgtcgcggttcgacacc
cggcggatcctgtggggtgaccccggccagaagtccgacgacgtctcgggcagcggctcc
tacacgcacatgacgatggtggccgagacgcccaccggcctgcgcaacctgttcaagctg
tcctcgttggcgtcgttcgagggccagctcggcaagtggtcgcggatggacgccgagatc
atcgccgaacacgccgagggcatcatcgccaccacgggctgcccctcgggggaggtgcag
acccggctgcgcctgggtcacgaccgcgaggcgctggagtcggcggccaagtggcgcgag
atcttcggcgccgacaactacttcctcgagctgatggaccacgggctgtccatcgagcag
cgggtccgcgacgggctgctcgagatcggccgcaagctgggcattccgccgctggccacc
aacgactgccactacgtcacccgcgacgccgcccacaaccacgaggcgctgttgtgcgtg
cagaccggcaagacgctctcggaccccaaccggttcaagttcgacggcgacggctactac
ctgaagtcggccgccgagatgcgccgcatctgggacgacgaggtccccggcgcctgcgac
tccaccctgttgatcgccgagcgggtgcagccctacgacgaggtctgggcgccgcgcgac
cggatgccgatcttcccggtgcccgaggggcacgaccaggcgagctggctacaccacgag
gtgatggcggggctggcgcgccgcttcccgtccggcgtcggccaggactacatcgaccgg
gccgagtacgagatcaaggtcatctgcgacaagggtttcccgtcgtactttttgatcgtc
gccgacctgatcaactacgcccggtcggtcgacatccgggtggggccggggcgcggttcg
gcggcgggctcgctggtggcctacgcgctgggcatcaccaacatcgatcccattccgcac
ggcctgctgttcgagcggttcctcaacccggaacgcccgtccgcgcccgacatcgacatc
gacttcgacgaccgccgtcggggcgaaatggtgcgctacgccgccgacaagtggggctcc
gaccgcgtcgcccaggtcatcaccttcggcaccatcaaaaccaaagcggccctgaaggac
tcggcacgcatccactacggccagcccggcttcgccatcgccgaccggatcaccaaggcg
ctgccgccgccgatcatggccaaggacatcccgctgtcggggatcaccgatcccgcccac
gagcggtacaaggaggccgccgaggtccgcggcctgatcgaaaccgaccccgacgtccgc
accatctaccagaccgcgcgcggcctggaaggcctgatccgcaacgccggggtgcacgcg
tgcgcggtgatcatgagcagcgagccgctgaccgaggccattccgctgtggaagcggccg
caggacggcgccatcatcaccggctgggactacccgtcgtgtgaggccatcggcctgctg
aagatggacttcctgggcctgcgcaacctgacgatcatcggcgacgccctggataacatc
aaggccaacaggggaattgacctcgacctggaatccgtcccgctggacgacggacccacc
tacgagctgctgggccgcggcgacaccctgggcgtgttccagctcgacggcgggccgatg
cgcgacctgctgcgccgcatgcagcccaccgagttcaacgacatcgtcgcggtgctggcg
ctgtaccgccccggcccgatgggcatgaacgcccacaacgactacgccgaccgcaagaac
ggccgccagccgatcaagccgattcacccggagctagaggagccgctgcgcgaaatcctc
tccgagacttacggtttgatcgtctaccaagagcagatcatgttcatcgcccagaaggtc
gcctcctacacgatgggcaaggccgacgcgctgcgcaaggccatgggcaagaaaaagctc
gaggtgctcgaggccgagtacaagggcttctacgagggcatgaccgccaacggcttctcc
gaaaaagcggtgaaggcgttgtgggacaccatccttccgttcgccgggtacgcgttcaac
aaatcacacgcggccggctatggcctggtctcgtactggaccgcctacctgaaggccaac
tatccggccgagtacatggccgggctgctgacctcggtgggtgacgacaaggacaaggcc
gccgtctacctggccgactgccgcaagctgggcatcactgtgttgccgcccgacgtcaac
gaatcgctggtgaacttcgcctcggtcggaacggacatccgtttcgggctgggtgcggtg
cgcaacgtcggcgccaacgtggtgggttcgctgatcagcacccgcaacggcaagggcaag
ttcaccgacttctcggactacctgaacaagatcgacatcgccgcctgcaacaagaaggtc
accgagtcgctgatcaaggccggcgcgttcgactcgctcggtcacgcccgcaagggcttg
ttcctggtgcacaccgacgcggtcgattcggtgctgggcaccaagaaggccgaggcgatc
ggccagttcgacctgttcggcggcgacgacgggtgcaccgaagcggtgttcaccatcaag
gtgcccgacgacgagtgggaggacaagcacaagctcgcgctggagcgggagatgctgggc
ctctacgtgtccgggcatccgctcaacggggtggcgcacctgctcgccgcgcaggtggac
acccagatcccggccatcctcgacggcgacgtgcccaacgagacccaggtgcgcgtcggc
ggcatcctcgcgtcggtcaaccggcgcgtcaacaagaacgggatgccttgggcgtcagcg
caattggaggacctcaccggtggcatcgaggtgatgttcttcccgcacgcgtattccacc
tatggcgccgacatcgccgatgacaccgtcgtgctgatcaacgccaaggtggccatccgc
gacgaccggatcagcctgatcgccaacgaacttgtggtaccggacttttccagcgcccag
gtgaaccggccgatcgccgtcagcctgccgacgcggcagtgcaccatcgacaaggtcagc
gcgctcaagcaggtgctggcccggcacccggggacctcgcaggtgcatctgcggctgatc
agtggggaccggatcacaaccctggaactcgatgcctcgcttcgggtgacgccgtcgccg
gcgttgatgggtgacctcaaggagctgctgggcccgggctgcctgggcggctag
DBGET
integrated database retrieval system
