Mycobacterium intracellulare ATCC 13950: OCU_33030
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Entry
OCU_33030 CDS
T02158
Name
(GenBank) holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCU_33030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_33030
Enzymes [BR:
mia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
OCU_33030
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCU_33030
RecFOR pathway proteins
OCU_33030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF4781
DUF4253
Motif
Other DBs
NCBI-ProteinID:
AFC44522
UniProt:
H8IU62
LinkDB
All DBs
Position
complement(3563131..3563685)
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AA seq
184 aa
AA seq
DB search
MRVMGVDPGLTRCGLSVVESGRGRTVVALDVDVVRTPSDAPLAERLLTISDAVEHWLATH
EPDVMAVERVFSQLNVSTVMGTAQAGGVVALAAARRGIDVHFHTPSEVKAAVTGNGAADK
AQVTAMVTRILALQAKPTPADAADALALAICHCWRAPMIARMAAAEALAAQQRQKYNAKL
KAAR
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgatgggcgtcgaccccggcctgacccggtgcgggctgtcggtcgtcgagagt
gggcgcgggcgcaccgtggtcgcgctcgacgtcgacgtggtgcgcacgccgtcggacgca
ccgctcgccgagcggctgctgacgatcagtgacgccgtcgagcattggctggccacgcat
gagcccgacgtcatggccgtcgagcgggtcttctcccagctgaacgtgtcgacggtgatg
ggcacggcccaggccggtggggtggtcgcgctggcggcggccaggcgcggcatcgacgtg
cacttccacacccccagcgaggtcaaggccgcggtcaccggcaacggcgcggccgacaag
gcccaggtcaccgcgatggtcaccagaatccttgcgctgcaagccaaaccgacgccggcg
gacgccgccgacgcgctcgcgctggcgatctgccattgctggcgggcgccgatgatcgcc
cggatggccgccgccgaggcgctggccgcccagcagcggcagaaatacaacgccaagctc
aaggccgcccgatga
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