KEGG   Mycobacterium intracellulare ATCC 13950: OCU_34270
Entry
OCU_34270         CDS       T02158                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
mia  Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:mia00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    OCU_34270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mia03021]
    OCU_34270
Transcription machinery [BR:mia03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     OCU_34270
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_20
Other DBs
NCBI-ProteinID: AFC44646
UniProt: H8IVW9
LinkDB
Position
3665413..3666879
AA seq 488 aa
MKRTATKSASSPAKRPAAKAANGSAPAKRAAKTTARSTKSDAAEPAKKTRAKGAEAKGRG
TKAAKGGPADPDALDSDGAVEDLDNEPDLEAEPGEDLDIDSDLSLDDLEEDVASEDAEVE
SGDSEVGDDEEAPAPAAAAEPAADEDDEIAEPTEKDKASGDFVWDEDESEALRQARKDAE
LTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTEMTERGDKLPAAQRRD
MQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKG
YKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELA
KEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQL
QSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRS
QVLRDYLD
NT seq 1467 nt   +upstreamnt  +downstreamnt
gtgaaacgcaccgccacgaagtctgcgtcgtcccccgccaagcgtccggcggccaaggcc
gccaatggctccgcgcccgccaaacgggccgccaagacgaccgcgcggtccaccaagtcc
gacgccgccgagcccgccaagaagacccgcgccaagggcgccgaggccaagggccgcggc
accaaagcggccaagggcggcccggcggatcccgacgccctcgattccgacggcgccgtc
gaggatctcgacaacgaaccagacctcgaggctgagcccggcgaggacctcgacatcgac
agcgacctgtccctcgacgacctcgaggaagacgtggcgtccgaagacgccgaggtcgaa
tcgggcgattccgaggtgggtgacgacgaggaggcgcccgcccccgcggcggccgccgag
cccgccgccgacgaggacgacgagatcgccgagcccaccgaaaaggacaaggcctccggc
gatttcgtctgggacgaggacgaatccgaggcgctgcgccaggcccgcaaggacgccgag
ctcaccgcctccgccgactcggttcgcgcgtacctcaagcagatcggtaaggtcgcgctg
ctcaacgccgaggaagaggtcgagctggccaagcggatcgaggccggcctgtacgccacg
cagctgatgaccgagatgaccgagcgcggcgacaaactgccggccgcccagcgccgcgac
atgcagtggatctgccgcgacggcgaccgcgccaaaaaccatctgctggaggccaacctg
cggctggtggtgtcgctggccaagcgctacacgggccgcggcatggcgttcctcgacctc
atccaggaaggcaacctgggtctgatccgcgcggtcgagaagttcgactacaccaagggc
tacaagttctccacgtacgccacctggtggatccgccaggccatcacccgggccatggcc
gaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtgatcaacaagctgggc
cgcatccagcgcgagctgctgcaggacctgggccgcgagcccacgcccgaagagctggcc
aaggaaatggacatcacgccggaaaaggtgctggagatccagcaatacgcgcgcgagccg
atctcgctggaccagaccatcggcgacgagggcgacagccagctgggcgatttcatcgag
gacagcgaggccgtggtggccgtcgacgcggtgtcgttcacgctgctgcaggaccagttg
cagtcggtgctcgagacgctctcggagcgcgaggccggcgtggtgcggctgcgcttcggc
ctcaccgacggccagccccgcaccctggacgagatcgggcaggtgtacggggtgacccgc
gagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccaccccagccgctcg
caggtgctgcgcgactacctggactga

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