Mycobacterium intracellulare ATCC 13950: OCU_34270
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Entry
OCU_34270 CDS
T02158
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mia
Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OCU_34270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mia03021
]
OCU_34270
Transcription machinery [BR:
mia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCU_34270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AFC44646
UniProt:
H8IVW9
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All DBs
Position
3665413..3666879
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AA seq
488 aa
AA seq
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MKRTATKSASSPAKRPAAKAANGSAPAKRAAKTTARSTKSDAAEPAKKTRAKGAEAKGRG
TKAAKGGPADPDALDSDGAVEDLDNEPDLEAEPGEDLDIDSDLSLDDLEEDVASEDAEVE
SGDSEVGDDEEAPAPAAAAEPAADEDDEIAEPTEKDKASGDFVWDEDESEALRQARKDAE
LTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTEMTERGDKLPAAQRRD
MQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKG
YKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELA
KEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQL
QSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRS
QVLRDYLD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcaccgccacgaagtctgcgtcgtcccccgccaagcgtccggcggccaaggcc
gccaatggctccgcgcccgccaaacgggccgccaagacgaccgcgcggtccaccaagtcc
gacgccgccgagcccgccaagaagacccgcgccaagggcgccgaggccaagggccgcggc
accaaagcggccaagggcggcccggcggatcccgacgccctcgattccgacggcgccgtc
gaggatctcgacaacgaaccagacctcgaggctgagcccggcgaggacctcgacatcgac
agcgacctgtccctcgacgacctcgaggaagacgtggcgtccgaagacgccgaggtcgaa
tcgggcgattccgaggtgggtgacgacgaggaggcgcccgcccccgcggcggccgccgag
cccgccgccgacgaggacgacgagatcgccgagcccaccgaaaaggacaaggcctccggc
gatttcgtctgggacgaggacgaatccgaggcgctgcgccaggcccgcaaggacgccgag
ctcaccgcctccgccgactcggttcgcgcgtacctcaagcagatcggtaaggtcgcgctg
ctcaacgccgaggaagaggtcgagctggccaagcggatcgaggccggcctgtacgccacg
cagctgatgaccgagatgaccgagcgcggcgacaaactgccggccgcccagcgccgcgac
atgcagtggatctgccgcgacggcgaccgcgccaaaaaccatctgctggaggccaacctg
cggctggtggtgtcgctggccaagcgctacacgggccgcggcatggcgttcctcgacctc
atccaggaaggcaacctgggtctgatccgcgcggtcgagaagttcgactacaccaagggc
tacaagttctccacgtacgccacctggtggatccgccaggccatcacccgggccatggcc
gaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtgatcaacaagctgggc
cgcatccagcgcgagctgctgcaggacctgggccgcgagcccacgcccgaagagctggcc
aaggaaatggacatcacgccggaaaaggtgctggagatccagcaatacgcgcgcgagccg
atctcgctggaccagaccatcggcgacgagggcgacagccagctgggcgatttcatcgag
gacagcgaggccgtggtggccgtcgacgcggtgtcgttcacgctgctgcaggaccagttg
cagtcggtgctcgagacgctctcggagcgcgaggccggcgtggtgcggctgcgcttcggc
ctcaccgacggccagccccgcaccctggacgagatcgggcaggtgtacggggtgacccgc
gagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccaccccagccgctcg
caggtgctgcgcgactacctggactga
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