Mycobacterium intracellulare ATCC 13950: OCU_39280
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Entry
OCU_39280 CDS
T02158
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mia03032
]
OCU_39280
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_39280
Enzymes [BR:
mia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OCU_39280
DNA replication proteins [BR:
mia03032
]
Prokaryotic type
DNA Topoisomerases
OCU_39280
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OCU_39280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFC45147
UniProt:
H8IM92
LinkDB
All DBs
Position
4148437..4149495
Genome browser
AA seq
352 aa
AA seq
DB search
MMRLRRSVLSKPGIARKRRGKGFSYYEPGGKPVSDPETLQRIKDLVIPPAWKKVWISPHP
NGHIQAVGVDAAGRRQYLYHSAWQAERAEEKFDRVLELSTRLPACRAEIAKDLARQGLTR
KRVLALALRLLDRGYFRAGGEQYAEEHESYGLSTLLCEHVVVRRDAVEFDFPAKSGVRRT
VEIEDPDVVRAVRALMRRPDRTERLLVCRNSSGWIDVRADDLNARFKELAGDDYTVKDLR
TWHGTVLAAAAFADADPAVSGRVAKRVEAAVMKEVAEELGNTPAVARGSYVDPRVVTGYE
QGLTIAAAARRAERAKSPDLAQEILDKATRMLIRRLAKADSANGSSGLRKTA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgcgtcgcagcgtgctgagcaagccgggaatcgcgcgcaagcgtcgcgga
aagggcttctcgtactacgagccgggcggcaagccggtttccgatccggaaaccctgcag
cgcatcaaggatctggtcatcccgccggcgtggaagaaggtgtggatctcgccgcatccg
aacggccacatccaggccgtcggcgtcgacgccgccggccgccggcagtacctctaccac
tccgcgtggcaggccgaacgcgccgaggagaagttcgaccgggtgctggaactgtcgacg
cggcttcccgcgtgccgcgccgagatcgccaaagaccttgcgcgccaaggcctgacccgc
aagcgggtgctggcgctcgcgctgcggctgctcgaccgcggttacttccgcgccggcggc
gagcaatacgccgaggaacacgagtcctacgggttgtccaccctgctatgtgagcacgtg
gtggtccggcgcgacgccgtcgaattcgactttccggccaagagcggggttcgtcgcacc
gtggaaatcgaggaccccgacgtggtccgcgcggtgcgtgcgctgatgcgcaggcccgac
cgcaccgagcgattgctggtgtgccgcaactcttccgggtggatcgatgtgcgcgccgat
gacctcaacgcccgattcaaggagctggccggcgacgactacaccgtcaaggacctgcga
acgtggcacggcacggtgctggcggccgcggccttcgccgacgccgacccggcggtatcg
ggccgggtggccaagcgcgtcgaggccgccgtgatgaaagaggtcgccgaggagctgggc
aacacgcccgcggtggcgcgcggttcctacgtggatccccgcgtcgtcaccggctatgag
cagggtctgaccatcgccgcggcggcgcgccgcgccgagcgcgccaaatcgcccgacctg
gcgcaggagattctggacaaggccactcgaatgctgatccggcgcctggccaaggccgac
agcgccaacggatcgtccggcctgcgcaagacggcatga
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