Mycobacterium intracellulare ATCC 13950: OCU_39940
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Entry
OCU_39940 CDS
T02158
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mia
Mycobacterium intracellulare ATCC 13950
Pathway
mia03420
Nucleotide excision repair
mia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OCU_39940
03430 Mismatch repair
OCU_39940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mia03400
]
OCU_39940
Enzymes [BR:
mia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OCU_39940
DNA repair and recombination proteins [BR:
mia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OCU_39940
MMR (mismatch excision repair)
Other MMR factors
OCU_39940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AFC45213
UniProt:
H8IN30
LinkDB
All DBs
Position
complement(4219752..4221860)
Genome browser
AA seq
702 aa
AA seq
DB search
MDAMPTVADPLTAGLDDEQREAVLAPRGPVCVLAGAGTGKTRTITHRIAQLVAGGHVAAG
QVLAVTFTQRAAGEMRSRLRAIDAAAGTGPAVGAVSALTFHAAAHRQLRYFWPRVVGDTG
WQLLDSKFAVVARAASRTRLNASTDDVRDLAGEIEWAKASLIGPEEYPAAVAAAGRDIPL
DAAQIAGVYAAYEALKARGEHVTLLDFDDLLLHTAAAIENDPAVAEEFRDRYRCFVVDEY
QDVTPLQQRVLTAWLGDRDDLTVVGDANQTIYSFTGASPRFLLDFSRRFPDATVVRLERD
YRSTPQVVSLANQVIAAARGRVAGSKLHLVGQRPPGPAPTFHEHPDEPAEAAAVAASIAR
LIESGTPPSEIAVLYRVNAQSEIYEEALTEAGIAYQVRGGEGFFNRQEIKQALLALHRAA
ERGAEGPLPDVVRAVLEPLGLTAQEPVGTRARERWEALSALAELVDDEVAQRPQLDFPGL
LAELRMRADARHPPVVQGVALASLHAAKGLEWDAVFLVGLADGTLPISHALAHGAESEAV
EEERRLLYVGITRARTHLALTWALARSPGGRQGRKPSRFLNGIAPQARAEPGPNKSRRNR
ATATRCRICNNNLTTPAAVMLRRCETCAADIDEDLLLRLKAWRLDVAKEQKVPAYVVFTD
NTLIAIAELRPDDDEALIAIPGIGARKLEQYGPDVLELVRGR
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatgccgacggtcgccgatccactgacagccgggctggacgacgagcagcgc
gaggccgtgctggctccgcgcggcccggtctgcgtgctggccggcgccggaacgggcaag
acccgcaccatcactcaccggatcgcccagctggtcgccggcggtcatgtcgccgccggc
caggtgctggcggtcacgttcacccagcgggcggcgggggagatgcgctcccggttgcgg
gcgatcgacgccgcggcgggcacggggccggccgtcggcgcggtctcggccctgaccttt
cacgccgccgcccaccggcagctgcggtacttctggccgcgggtggtcggtgacaccggg
tggcagctgctggacagcaagttcgcggtcgtggcccgggcggccagccgcacccggctc
aacgccagcaccgacgacgtgcgcgacctggccggcgagatcgagtgggccaaggcgtcg
ctgatcggccccgaggaataccccgccgcggtggccgccgccgggcgggacatccccctg
gacgccgcccagatcgccggcgtctacgccgcctacgaggccctcaaagcgcgcggcgaa
cacgtcaccctgctcgatttcgacgacctgctgctgcacaccgcggccgcgatcgaaaac
gacccggcggtggccgaggagttccgcgaccgctaccgctgcttcgtggtcgacgaatac
caggatgtcacgcccttgcagcagcgggtgctgaccgcctggttgggcgaccgcgacgac
ctgacggtggtgggcgacgccaaccagaccatctactcgttcaccggggcctcgccgcgg
ttcctgctcgacttctcccgccgcttccccgacgccaccgtcgtgcgcctcgagcgcgat
taccggtccaccccccaggtggtctcgctggccaaccaggtgatcgccgcggcccgcggg
cgggtcgccggcagcaagctgcacctggtgggtcagcgcccgccgggtcccgcgccgacg
ttccacgagcatcccgacgagccggccgaggccgccgcggtcgcggcgtcgatcgcgcgg
ctcatcgaatccggcaccccgccgtccgagatcgccgtgctgtaccgggtcaacgcgcag
tcggagatctacgaggaggcgctgaccgaggcgggcatcgcctaccaggtccgcggcggc
gagggattcttcaatcgccaggagatcaagcaggccctgctggcgctgcatcgggccgcc
gagcgcggtgcggagggtcccctgcccgacgtcgtccgcgcggtgctggaaccgctgggc
ctgacggcccaggagccggtcggtacccgcgcccgcgagcgctgggaggccctgagcgcg
ctggccgaactggtggacgacgaagtcgcgcaacgcccgcagctggactttccggggctg
ctggccgagcttaggatgcgcgccgacgcccggcacccgccggtggtgcagggcgtcgcg
ctggcatcgctgcacgccgccaaggggctcgagtgggacgcggtgttcttggtcgggttg
gccgacggcacgcttcccatctcacacgcgctcgcccacggcgccgagagcgaggcggtc
gaggaggagcgccgcctgctttacgtcggaatcaccagggcccgaacgcatttggcgctc
acctgggcgctggcccgcagcccgggcgggcgccagggccgcaagccgtcgcggttcctc
aacggcatcgcaccccaggcacgggccgagccggggccgaacaagtctcggcgcaaccgg
gccaccgcgacccgctgccggatctgcaataacaacctcacgaccccggcggccgtcatg
ctgcgccgctgcgagacctgcgcggccgacatcgacgaggacctgctgctccggctcaag
gcgtggcggctggacgtcgccaaggaacagaaggtgcccgcctacgtcgtcttcaccgac
aacacgctgatcgccatcgccgagctgcggcccgacgacgacgaggcgctgatcgcgatt
cccggcatcggcgcgcgcaagctggaacagtacggccccgacgtgctggagctggttcgc
ggtcgctga
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integrated database retrieval system
