Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0141
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Entry
UY43_C0001G0141 CDS
T04022
Name
(GenBank) 2'-5' RNA ligase, 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mib03016
]
UY43_C0001G0141
Enzymes [BR:
mib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
UY43_C0001G0141
Transfer RNA biogenesis [BR:
mib03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
UY43_C0001G0141
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AKM78892
LinkDB
All DBs
Position
106165..106725
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AA seq
186 aa
AA seq
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MRLFVGLPLSDEAKRGVAKIIKDLKRGHWPVRWEDEDKWHFTAAFLGEVDKFDRVAAAVK
RGVGEIKPFEVGFKGLGAFPFLVIPKVIWLGLNGDLKTMARLYKQVRAELSGAGFEFEER
SFMPHVTIGRVGKEAKRKQRLELGKLVAKKLQLKIPQRWQVDRVVVYESRLSPKGSKYQV
IEEINL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgtttgtcggcttgccgctaagtgacgaggccaagcggggggtagccaaaata
atcaaagatttaaaacggggtcactggccggtgagatgggaagatgaagacaagtggcac
tttacagcagcctttttaggagaagtagataagttcgatcgggtagccgcagcggtcaaa
agaggcgttggcgagataaaaccgtttgaagttggttttaagggattgggtgcgtttccc
tttttagtgatccctaaagtcatctggttaggcttaaacggcgacttgaaaaccatggcc
cggctttacaagcaagtgagggcggagttgtccggggcggggtttgagtttgaggaaaga
tcgttcatgccccacgtgactataggcagagttggtaaagaagctaaaagaaaacagcgg
ttggaactgggaaagctggtggccaaaaaacttcagcttaaaatcccccaacgttggcag
gtcgacagagtggtggtgtatgagagcaggctctcgcccaaaggatcaaagtatcaagtg
atcgaagaaattaacctgtga
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