Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0202
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Entry
UY43_C0001G0202 CDS
T04022
Symbol
rpfA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
UY43_C0001G0202 (rpfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mib03011
]
UY43_C0001G0202 (rpfA)
Ribosome [BR:
mib03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
UY43_C0001G0202 (rpfA)
Bacteria
UY43_C0001G0202 (rpfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
SH3_2
PCB_OB
CsrA
PilZN
Motif
Other DBs
NCBI-ProteinID:
AKM78950
LinkDB
All DBs
Position
162990..164135
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AA seq
381 aa
AA seq
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MAKKTIKAVKKSGKEPQTMDELLKATGYKLKGLKKGQLVEGVVTDVTRGAILIDIGAKTE
GVVVDKELEVARELMEHLSVGDTVQAYVGSPENERGQILLSLRQAVMDKRWELFERLLKT
GEAVAVRGLEVNKGGIIVRSRGVRGFVPSSQFGRKYLGKLDELKNEKFEVKVIEVDREKN
RLIFSEKAVSEQEALAKQNEALKLVSPGDELSGVVSGIMPFGVFVRANVPLKKKAKTKQA
DKELFLEGLVHISEISWEKVENPGNYFKTGDKIKVKVIGVDEKSARLNLSVKQLMADPWE
KIAKDYPEGSKVKGEITRMASFGAFVSLAAGVDGLIHISKIPADSQFKVGQKIECFVEQV
DMSHRRMSLSLALIKKPVGYK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagacgatcaaggcggtaaaaaagtctgggaaagagccccagacgatggac
gagttattgaaggcaacgggatataagctcaaaggtttgaaaaaaggccagctggtagag
ggagtggtaactgacgtgacccgcggggcaatcctgattgacattggcgccaaaaccgaa
ggggtagtggtggacaaggagctggaggtagccagggagttgatggagcatttgagcgtg
ggcgatacggttcaggcttatgtgggttcgccggaaaatgagcgggggcagattttactt
tctttaagacaagcggtgatggacaagcgctgggagttgtttgaaaggctacttaagacc
ggcgaggcggtggctgtccggggcctggaagtgaacaagggagggattattgtccgaagc
cgcggggtacgagggtttgtgccatcaagtcagtttggcaggaagtatttgggcaaactt
gatgaattgaaaaacgagaagtttgaggtcaaggtgatcgaggtcgatcgggagaagaac
cggctgattttttcggagaaggcggtttctgaacaggaggctttggccaagcaaaacgaa
gccttaaagctggttagtccaggtgacgagctgtccggagtagtgtcgggaatcatgcct
tttggtgtgtttgtcagggccaacgtgcccctaaagaaaaaagccaagacgaagcaggcg
gataaggagttgtttttagaaggtttggtgcacatatcggagatttcctgggaaaaggtg
gagaatccgggcaattactttaagacgggagacaagattaaagttaaagtaattggggtg
gatgagaaaagcgccaggcttaatttgtcggtgaaacagctgatggctgatccgtgggag
aagattgccaaagactaccccgaaggcagcaaggtaaaaggcgagattacccgaatggct
tcctttggagcctttgtcagcttggcggccggggttgacggcttgatccacatctcaaag
attccggcagacagccagtttaaagtgggccagaaaattgagtgctttgtggaacaggtg
gatatgtctcacaggcgaatgagtttgagcttggctctaatcaaaaagccggtaggctat
aaataa
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