Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0294
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Entry
UY43_C0001G0294 CDS
T04022
Symbol
ine55
Name
(GenBank) putative tRNA pseudouridine synthase, tRNA pseudouridsynthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mib03016
]
UY43_C0001G0294 (ine55)
Enzymes [BR:
mib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UY43_C0001G0294 (ine55)
Transfer RNA biogenesis [BR:
mib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UY43_C0001G0294 (ine55)
Prokaryotic type
UY43_C0001G0294 (ine55)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AKM79039
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All DBs
Position
251850..252515
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AA seq
221 aa
AA seq
DB search
MDFVKGQVNLDEDILVVDKPVGWTSHDVVAKIRGELGKHETRSTKLETKIGHGGTLDPFA
TGVLLILVGKATRRFEEIKTWDKEYVMTVKLGAATTTGDPEGEVTETRPVTGVKRERVER
ALRDLTGFYQQQVPAYSAVKVGGERLYALAREGKEVKLPRRQVEIKEIELVDLQGLSLKV
RVVCGSGTYMRQLAVDIGEKLDLPAHAAALRRTRVGDYELS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtaaagggtcaagttaatttagatgaggatattttggtggtggataagccg
gtgggttggaccagccatgacgtggtggctaaaataagaggggagcttggtaagcacgaa
actcgaagcacgaaactcgaaactaaaatcggtcacggggggacgctggatccgtttgcc
accggggtgcttttaatcttggtggggaaagccaccagaaggtttgaagagataaaaact
tgggataaggagtatgtgatgacggttaaattaggggcggccacgaccacgggcgatcct
gaaggagaggtaacggaaaccaggccggtaacaggggtaaaaagggaaagggtagagagg
gctttgagagatttgacggggttttaccagcaacaagtgccggcttactcggcggtaaaa
gtaggcggggagaggctttacgcccttgcccgggagggaaaagaggtcaagttgccccgg
cgtcaggtagagatcaaagagattgagctagttgaccttcaaggtttatccttgaaggta
agggtggtttgcggcagcggcacctatatgaggcagttggcggtggatataggagaaaag
cttgatcttcccgctcatgcggcggctctgcgccgcacccgggtaggtgactatgagtta
tcttga
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