Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0500
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Entry
UY43_C0001G0500 CDS
T04022
Name
(GenBank) excinuclease ABC subunit A, excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UY43_C0001G0500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mib03400
]
UY43_C0001G0500
DNA repair and recombination proteins [BR:
mib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UY43_C0001G0500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UY43_C0001G0500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
nSTAND1
AAA_16
RsgA_GTPase
AAA_29
DnaJ_CXXCXGXG
AAA_25
AAA_23
AAA_15
Viral_helicase1
Mtrc-MtrF_II-IV_dom
Motif
Other DBs
NCBI-ProteinID:
AKM79225
LinkDB
All DBs
Position
complement(419272..422196)
Genome browser
AA seq
974 aa
AA seq
DB search
MNHIAIQGARQHNLKNIAVKIPKGKLVVFSGLSGSGKSSLAFDTIYAEGQRRYVESLSSY
ARQFLGLMTKPDVDQIDGLSPAIAIDQKTTSSNPRSTVGTITEVYDYLRLLYARIGHPHC
ANCGREIAKQSLDQIAGLVKDLILTSLTATKPSRFIILSPVVRDKKGEFSQLFNNLAKKG
FVRVRIDGKFFDLDSPPALIKTNRHTIDAVVERLSFTKKQAKDASEVDKLKKRLSESLEA
ALKLSDGLALAVEIKDASLNFPDHPQKLTDHLFSEHFACHHCNLSLPEIEPRIFSFNSPH
GACPTCSGLGHLQKIDPDKIIAPSLTLAEGAIIPFAKQLSADSWLARTVKEVVHAHRANT
QTRWDNLSDDLQHILLYGTKEIFEVTGTNRFGRITTIHTDFEGAIPALERRFQETQSDFI
RNEMQKFMSLETCPDCNGDRLKPESLSVSIDNLNIADLTKLSIKDTFSFIANLTQKGSPL
SDKERQIGQLILKELATRLKFLLSVGLDYLTLSRAAGTLAGGEAQRIRLASQIGTGLTGV
LYILDEPSIGLHQRDNRRLITTLKNLRDLDNSVIVVEHDREIIESADYLIDFGPLAGKHG
GEVVAAGTPKQVAANPKSLTGKYLNGKKKVSLSLPASLPLEKNQKMLTLAGCTQNNLKNI
KIDFPLSQFIVITGVSGSGKSSLIHDTLYPAVKDNLKSPHSPTPQNYHHLSGLEHLTRVS
LIDQSPIGRTPRSNPATYTKAFDHIRTLFSLTRDAKVAGFKPGRFSFNVKGGRCESCQGE
GQVKIEMQFMPDVYITCEVCHGARYNQQTLAVKYHDQDISQILHLTVDEALEFFPSHQAL
HLKLKTLKDVGLGYIELGQPAPTLSGGEAQRVKLAKELSVKSQGHTLYLLDEPTTGLHFE
DLKKLLFVLKQLVNQNNTVVVIEHNLDVVKNADWVIDLGPEGGEAGGQVVATGTPQQLAK
ITTSYTGHFLKKIL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacatcgctatccaaggcgctcgccaacacaacctcaaaaacatcgcggttaaa
attcccaaaggaaagctcgtggtcttctccgggctgtccgggtcgggtaaatcatctttg
gcctttgacaccatctacgccgaaggtcaacgccgctacgtcgaatcattatcgtcatat
gcccggcagtttttagggctgatgaccaagcccgacgtcgaccagatcgacggcttatca
ccggctattgccatcgatcagaaaaccacctcaagtaacccccgatcaaccgtcggtacc
atcaccgaagtctatgattacttaagactactttacgcccgtatcggccacccccactgc
gccaactgcggccgagagattgccaagcagtcgctcgaccaaatcgccggcctggtcaaa
gacttgattctaactagcctcaccgccaccaaaccctctcgatttatcatcctgtctcca
gtggtccgcgacaaaaaaggcgaatttagccagcttttcaataatctcgccaaaaagggt
tttgtcagagtgagaattgatggtaagttttttgacttggacagcccgccggctttaatc
aaaaccaaccgccacaccatcgacgctgtagtcgagcgcttaagcttcaccaaaaaacaa
gctaaagacgctagcgaggtggacaaacttaaaaaacgcctctcggaaagcttagaagct
gcccttaaattgtccgacgggttggctttggccgttgagattaaagacgcttcgttaaac
tttcccgaccacccccagaagctgaccgaccatcttttttccgaacactttgcctgccac
cactgtaacttaagtctacccgaaatcgaaccgagaatcttctccttcaactcaccccac
ggtgcctgccctacctgtagcggtttaggccatttacaaaaaatcgaccccgacaaaatc
atcgccccaagtctcactcttgccgaaggagcgatcattccctttgccaaacaattatct
gccgattcctggttagcccgcaccgtcaaagaggtggtccacgcccaccgggcgaatacg
caaacccgttgggacaacctgtctgatgatctccaacacatcttgctttatggcaccaaa
gagatttttgaggtcaccggcaccaaccgttttggcagaatcaccactatccataccgac
tttgaaggcgccatccccgccttagagcgccgtttccaagaaacccagtccgactttatc
agaaacgaaatgcaaaagtttatgagtctcgaaacttgccccgactgtaatggcgacaga
ctcaaacccgagtccttatcggtcagcatcgacaacttaaacatcgccgatttgaccaaa
ctatccattaaagacacctttagctttattgccaatcttacccaaaaaggcagccctttg
tcggacaaagaacgccaaatcggtcagctcattttaaaagagctagctaccaggttaaaa
ttcctcctctcggttggcctcgactacctcaccttgtcgcgcgcagccggcactcttgcc
ggcggcgaggctcaaaggattaggctcgcctcgcaaatcggcaccggtttaaccggcgtt
ttatacatcctcgacgaaccctcgatcggcctccaccagcgagataaccggcggttaatc
actaccctcaaaaatctgcgcgacctcgataacagcgttatcgtcgtcgaacacgaccgg
gagatcattgagtcggccgactatctgatcgactttggaccgcttgccggtaaacatggc
ggagaagtggtcgccgccggcactcctaaacaagtcgccgccaaccccaagtctttaacc
ggaaaatacttaaacggcaaaaagaaagtttccctgtctctgcccgcttcgcttcccctg
gaaaaaaaccagaaaatgctcacccttgccggctgtacccaaaacaaccttaaaaatatt
aaaatcgatttccctctgagccagtttatcgtcattaccggcgtctccggttcgggtaag
tcgagcttaatccacgacactctctacccggcagttaaagacaacctcaaatcacctcac
agccccactccgcaaaactaccaccatctttccggcctcgaacaccttacccgagtgtct
ttaattgatcaaagtcctatcggccgcacccccagaagcaatcccgctacctacaccaaa
gcctttgatcatatcagaaccctttttagcctgactcgcgacgccaaagtggccggtttc
aaaccgggacggttttcttttaacgtcaagggcggccgctgcgagtcctgccagggcgaa
ggccaagtcaaaatcgaaatgcagttcatgcccgacgtctacatcacctgcgaagtctgc
cacggcgcccgctacaaccagcagacgctggcggtaaaataccacgaccaagacatctct
caaattcttcacttgaccgtcgacgaagccttggaatttttccccagtcaccaggcttta
catctcaaattaaaaactctcaaagacgtcggcctgggctacatcgagttggggcaaccg
gctccgacgctttccggcggcgaagcccaaagggtcaaactggccaaagaactgtccgtc
aaaagccaggggcatacgctttatcttctggatgagcctaccaccggcctccactttgaa
gatttaaagaaactgctttttgttttaaaacaactggttaatcaaaacaacaccgtggtg
gtcatcgagcataatctggatgtggttaaaaacgccgactgggtgattgaccttggcccc
gaagggggagaggcgggcggccaggtggtcgccaccggcaccccgcaacagctagccaaa
atcaccacctcctacaccggccactttttaaaaaagattctatga
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