Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0501
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Entry
UY43_C0001G0501 CDS
T04022
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B, excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UY43_C0001G0501 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mib03400
]
UY43_C0001G0501 (uvrB)
DNA repair and recombination proteins [BR:
mib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UY43_C0001G0501 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UY43_C0001G0501 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
UPF0146
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKM79226
LinkDB
All DBs
Position
complement(422193..424262)
Genome browser
AA seq
689 aa
AA seq
DB search
MPFRLKADFKPTGDQPQAIDKLVAGLKKGQPQQTLLGVTGSGKTFTIANVVAKTQAPTLV
ISHNKTLAAQLYQEFRDFFPDAAVSYFVSYYDYYQPEAYLPATDTYIEKETDINEEIDKL
RLSATTNLLTRPDVIVVASVSAIYNLGSPVEYGRYTLELIQGQLVDRDTIIDRLTDLQYQ
RNDLAPSRGNFQVRGEQITIWPSYADYLVRLVMLDNQIETLARINPVTAAPLPRPNQGAP
RDVIYPAKHYLTNPITQKAAIQLIKLDLKTRLEQFKVAGKIVEAYRLKQKVEHDLEMINE
VGYVNGIENYSRYFDGRDPGQPPYTLIDYFHLNSQKFGRRFLTVIDESHMTIPQIRGMFR
GDQARKKTLIDYGFRLPSALDNRPLRFPEFLNRVPQTIYTSATPSDWEISVSGETVEQLI
RPTGLTDPIVTILPTAGQVKDLTQRVNQRKKLGQRVLVTTLTKKMAEALTEYLNEHSRSG
VAPAAHSGSERLRVQYLHADVATLDRSDILDSLRSGEYDVVVGINLLREGLDLPEVSLVA
ILDADKEGFLRSKTSLIQTMGRAARHVAGEVVMYADAKTDSMRAALKEVGRRRKIQLDYN
RRHRITPRSVTKPVRKKLIDRPQPLTITPTIIQIGSKEILNLKTLNPDSLTPEDKKRYLR
GLTRQMNQAAAVLDFEQAAILRDAIKKLT
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccatttagactcaaagccgactttaaaccgaccggcgaccagccccaggcaatagac
aagctggtggccggtctcaaaaaaggccaaccccagcaaactttgctcggggtcaccggc
agcggcaaaaccttcaccatcgccaacgttgttgccaaaacccaagcgcccacgctggtc
atttcccacaacaagactctcgccgcccaactctatcaggagtttagagattttttcccc
gatgcggcagtgtcttactttgtctcctactacgactactaccagcccgaagcgtactta
cccgccaccgacacctacatcgaaaaagaaaccgacatcaacgaggagatcgacaaactc
cggctgtcggccaccaccaatttactcacccgccccgacgtcatcgtcgtcgcctctgtc
tcggccatctacaacctgggctcgcccgtagaatacggccgctacaccctggagctaatc
caagggcagctggtcgaccgcgacaccatcattgacagactcaccgacctgcaataccaa
agaaatgacctggcgccttcacgaggcaacttccaagttaggggggagcaaatcaccatc
tggcctagctacgccgactacttggtgcgcctggtcatgcttgataaccagatagaaacc
cttgcccggattaatccggttaccgccgcgcccttgccccggcccaaccagggtgctccc
cgcgacgtcatttatccggctaaacactaccttaccaatccaatcacccaaaaagcagcg
attcaattaattaaattggatctgaaaacccgcctggaacaatttaaagtcgccggtaaa
atcgtcgaagcctaccgcctaaaacaaaaagtcgaacacgacttggagatgattaacgag
gtcggctacgtcaacggcatcgagaactactccagatacttcgacggccgcgaccccggc
caacctccctataccctgatcgactactttcacttaaactcccaaaaattcggccgccgg
tttttgaccgtcatcgacgagtcccacatgaccattccccaaatccgcggcatgttccga
ggcgaccaagcccggaaaaagactctcatcgactacggcttcaggctcccttcggctctg
gacaaccgccccttacgcttccccgagtttttaaaccgagtaccgcaaaccatctatacc
tcggctactccttcagactgggaaatttcggttagcggggaaaccgttgagcagttaatc
cgccctacaggactcaccgacccgatagttaccattcttcccaccgctggccaggtcaaa
gacttgactcaaagagtcaaccaaagaaaaaaactgggccaaagagtcttagttaccact
ctcaccaaaaaaatggccgaagccttaaccgagtacttaaacgaacactcccggagtggt
gttgcgcctgcggcacactccgggagtgaaagactccgagtccaataccttcacgccgac
gtcgccacgctggaccgctccgacattctggactcactccgctccggcgagtacgacgtc
gtcgtcggcatcaacctcctccgcgagggcctcgatttacccgaagtcagcttggtggcc
attttggacgccgacaaagaaggtttcttaagaagcaaaacgtctctgattcaaaccatg
ggccgggccgcccgccacgttgccggcgaagtggtcatgtacgccgatgccaaaaccgat
tcgatgcgcgccgccctcaaagaagtcggccgccgccggaaaattcagcttgactacaac
cgccgccaccggattaccccccggtcggtcaccaaaccggtgagaaaaaaactcatcgac
cggcctcaaccgctgaccatcaccccgacaataattcaaatcgggagtaaagagatcctc
aacttaaaaactttaaatcccgacagcttaaccccagaagacaaaaaaagatatctccgc
ggtttaacccggcagatgaaccaggcggcagcggtcttggactttgaacaagctgccatt
ttaagagacgccatcaagaaactaacatga
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