Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0992
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Entry
UY43_C0001G0992 CDS
T04022
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UY43_C0001G0992 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mib03021
]
UY43_C0001G0992 (rpoA)
03400 DNA repair and recombination proteins [BR:
mib03400
]
UY43_C0001G0992 (rpoA)
Enzymes [BR:
mib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UY43_C0001G0992 (rpoA)
Transcription machinery [BR:
mib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UY43_C0001G0992 (rpoA)
DNA repair and recombination proteins [BR:
mib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UY43_C0001G0992 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AKM79706
LinkDB
All DBs
Position
complement(888536..889453)
Genome browser
AA seq
305 aa
AA seq
DB search
MLKVNFKTTARAVSRDFGRFELSPLEPGYGLTLGNAIRRVLLTSLPGAAVTKVSIEGVSH
QFTTLSGMRQDVVEFLLNLKQVRFKFTGDKPVEAEITATGPGKIKAGDIKAPAKVKVVNA
DLVLADLSDKKAKLEAKLTISPGYGYQSSKDRQPEKLGEIVLDATFSPVLRVKYHVDTAR
VGRRTDLDKLVLEITTDGSIKPAEALSHAARILIASFTQIVEPTFEKAKAEEVVKEDDDE
ALKLSVEELDLPTRIANALRKGGYATVKDFAGVSVADIAKVKNLGGKSVDIIIKKLKAKG
IKVKG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagtaaactttaaaaccactgcccgggccgtcagtcgcgatttcggccgcttc
gagctttcgccgctcgagcccggctacggcttgactctcggcaacgccattcggcgggtg
ctcttaaccagccttcccggcgccgccgtcaccaaggtatcaatcgagggcgtcagccac
caatttaccacgctttccggcatgcgccaggacgtggtcgaattcttgttaaacttaaag
caggttcgctttaagtttacgggcgacaaaccggtcgaggcggaaatcaccgccaccggc
ccgggcaaaatcaaagccggcgacatcaaggccccggccaaggtcaaagtggtcaacgcc
gacctggttttagccgatctttctgacaaaaaagccaaactcgaggctaagctcaccatc
agccccggctacggctaccaatcgagcaaagaccgccagccggaaaagttaggcgagata
gtcttagacgccaccttttctccggttttgcgcgtcaagtaccacgtcgacaccgcccgc
gtcggcaggcgcaccgacctggacaagctggtgctggagattaccaccgacggctccatc
aagcccgccgaggcgctaagccacgccgcccggatcttgatcgcctcctttacccaaata
gtcgagccgactttcgagaaagccaaggcggaagaggtggtcaaagaggacgacgacgag
gctctcaagctctcggtcgaggagctagacttacccacgcgtatcgccaacgccctaaga
aaaggcggctacgccacggtcaaggactttgccggcgtcagcgtcgccgacatcgccaaa
gtcaaaaacctcggcggtaagtcggtcgacatcatcattaaaaaattaaaagccaaaggc
ataaaggtcaaaggttaa
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