Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G1044
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Entry
UY43_C0001G1044 CDS
T04022
Name
(GenBank) pnp, polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UY43_C0001G1044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mib03019
]
UY43_C0001G1044
03016 Transfer RNA biogenesis [BR:
mib03016
]
UY43_C0001G1044
Enzymes [BR:
mib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
UY43_C0001G1044
Messenger RNA biogenesis [BR:
mib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
UY43_C0001G1044
Transfer RNA biogenesis [BR:
mib03016
]
Prokaryotic type
tRNA degradation factors
UY43_C0001G1044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
S1_RRP5
Arena_nucleocap
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AKM79758
LinkDB
All DBs
Position
complement(931856..934072)
Genome browser
AA seq
738 aa
AA seq
DB search
MITETVTLGEKQLSLEVGQFAQQATAAVLVRSGDTVVLVTVVVGGERPDLGYFPLTVEYQ
EKLYASGIIKGSRWVKREGRPTDEAILKARLIDRSIRPLFPAGYMKEVQVVATVLSYDLQ
NDPDILGLIGASAALSISPIPWSGPIAAVRIGLNDQDELLVNPIRDEQATSKLELTVSGS
EAAIVMVEAGAKEVSEAKMLEALELAQRNIKTICAGINQLADKFKTKKETFTASKVDGQI
KKQILAKAKTSLEDLLDNLAATAATEVGPRHALDEVTAAVKEALSDLDAQAVAEVIQSEF
NDRVRQKILTKKSRADKRPPDKIRELNSAVSVLPRTHGSAIFARGATQALTLTTLGSPSL
EQLIEDLEGETSKRYIHHYVFPPYSVGETGRLGWPSRREVGHGTLAERALAPMIPDENKF
PYTIRVVSEIMSSNGSTSMASVCGSTLSLMDAGVPLVKPVAGIAMGLIARLRPGSGGQTE
IEDYVILTDITGLEDHLGDMDFKVAGTRDGITALQMDIKISGVTPTILKEALDAAKIARL
TILEHMKETLPEPKKQVSTFAPKIATINIPVEKIGELIGPGGRMIKKIIKETGCEVDVDD
DGRVVISGTDADKLKGAVDWVSGLTREFVVGEEFDGKVVRIEAYGAFVELTPGRDGLVHV
SRLATSYVADPNTIVKLGETLHVRVREIDEQGRVSLTALTPEQEREAAQNRPPRPAGGFN
RDRRPGGRPPFRRIDHRR
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgataaccgaaaccgttactttgggagaaaaacagctttctttggaagtcggccagttt
gcccagcaagccaccgccgcggtgctggtccgctctggcgacaccgtggttttagtcacc
gttgtggtcggaggcgagcgccccgacttaggctactttcctttaaccgttgagtaccag
gagaaactttacgcctcgggcattattaaaggttcccgctgggtcaaacgcgaaggtagg
ccgaccgacgaagcgattttgaaggcgcggttgattgaccgatccatccggccgctgttc
ccggccggctacatgaaagaagtccaagtggtcgccaccgtgttgtcttatgatttgcaa
aatgaccccgacattttggggctaatcggcgcctcggcggctttgagcatttccccaatt
ccctggtccgggccgattgccgcggtcagaatcggtttaaacgaccaagacgaattgtta
gtcaacccgattcgggatgaacaagcgacttcgaaattggagttgactgtttcagggtca
gaagctgccatcgtcatggtcgaagccggcgccaaagaagtttccgaagccaaaatgctt
gaggccttagagttggcccaaagaaacataaaaacaatttgcgccggcatcaatcaactg
gccgacaagttcaaaactaaaaaagaaactttcactgcctcaaaagttgacggccaaata
aaaaagcaaattttggctaaggctaaaaccagcctcgaggaccttttagataatttggcc
gccactgccgccaccgaagtcgggccgcgccatgccctggacgaagttactgccgccgtt
aaagaagcgctgtccgatttagacgcccaagcggtagccgaagttatccagagtgagttt
aacgatcgggtgcggcagaagattttaaccaaaaagagccgcgccgataagcgcccaccg
gataagataagggaattaaactcggctgtatcggtgttgccgcgcacccacggatcggca
atatttgcccggggagcaacccaagccttaactttgaccactttaggttcgcccagcctt
gagcagttgatagaagatttagaaggtgaaacttcaaaacgctacattcatcattacgtt
ttcccgccctactcggtcggggaaacgggcaggttgggttggccttcacggcgcgaagtg
ggccacggcactttggccgagcgggcgctggccccgatgattcctgatgagaataagttt
ccttatactattagagttgtctccgaaatcatgtctagtaacggctctacctctatggcc
tcggtttgcggctcgactttatctttaatggacgccggtgtgcctttagttaaaccggta
gccggaattgccatgggcttgattgcccgccttcgtccaggctccggcgggcagacagaa
attgaagactatgtgattttgacggacattaccggcctggaagaccatttgggcgacatg
gattttaaagtggccggaacccgcgacggtatcactgccctgcaaatggacattaaaatt
tccggagtgaccccgaccattttaaaagaagcgcttgacgcggccaaaattgcccgcttg
acgattttggagcacatgaaggaaactctgcctgaacccaaaaaacaagtttcaaccttt
gccccgaagatcgccacgattaacattccggtggaaaagatcggcgagctgatcggcccg
ggcggcagaatgattaaaaagattattaaagaaaccggttgtgaggtggacgttgacgat
gacggccgggtggtaatttccgggaccgacgctgataagttaaaaggtgcggtcgattgg
gtcagcggtttaaccagagaatttgtcgtcggcgaagagtttgacggcaaagttgtccgg
attgaagcttacggcgcttttgttgagctgactccgggccgagacggcttggtccacgtg
tcgcggctagctaccagttacgtggccgacccgaacacgattgtcaaactgggcgagact
ctgcacgttcgcgtccgggaaatagacgagcagggccgggtgagtttgactgccttaact
ccagaacaggaacgcgaagcggcccaaaaccggccgccgcgaccagccggcggttttaac
cgcgatcgccgccctggcgggcgcccgccctttaggcgcatcgatcaccgccgttag
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