Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G1073
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Entry
UY43_C0001G1073 CDS
T04022
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mib
Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03420
Nucleotide excision repair
mib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UY43_C0001G1073
03430 Mismatch repair
UY43_C0001G1073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mib03400
]
UY43_C0001G1073
Enzymes [BR:
mib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UY43_C0001G1073
DNA repair and recombination proteins [BR:
mib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UY43_C0001G1073
MMR (mismatch excision repair)
Other MMR factors
UY43_C0001G1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AKM79787
LinkDB
All DBs
Position
960724..962526
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AA seq
600 aa
AA seq
DB search
MPKSLTKALNPPQKLAVTFGEGPLLILAGAGSGKTRALTYRVAYLIKERQVDPKRILLVT
FTNKAAGEMRQRLEKLVGRDHSAGLFAGTFHAFCVRLLRIDGGKIGIEPNFVIYDEADSL
AVIKKAIKNLKLNPKTYKPRGVKSLISQAKNELISAEAYPQYARGEWQKGVAEIFLEYQR
LLNRFRALDFDDLLMKAVYLLKKDQPTRQKYQDRYQWVLVDEYQDTNKAQYELTKILAGK
WRNLAAVGDFSQSIYAFRGADYRNINQLKQDFADLRQISLEQNYRSTQTILDAATAVIAK
NSLHPVLTLWTKAGLGAKVKIFEADNEKEEAGFIVATIKNDPGSHAVLYRTNAQSRVIEE
ALLKNGMAYSLVGGVRFYARREIKDLTAYLRLINNPKDLVSYQRLEKLGKRSLNRFVNWL
DQKKNIDKLPTRKILEQVVKVTGYLDRFDKKNEEDLNRLENIDELNSVAEEFKDLGAFLE
NAALVEAADRPTLKGKENHEGVTLMTMHNSKGLEFDTVFMIGMEEGLFPHSRSSFNKEDL
EEERRLCYVGMTRAKRQLYLSYARGRFYFGRRNYNTVSRFLADIDEGLLEFVNQEFDIIT
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaatccctgactaaagctttaaacccgcctcaaaaactggcggtgacttttggc
gaaggacctttgctcattttggcgggagcgggttcgggaaaaacccgggccttgacttat
cgggtagcctatttgatcaaggagcgccaagtggatccgaaaaggattttactggtgacg
tttaccaacaaggcggcgggtgagatgagacaacggctagaaaagttagtaggacgagac
cacagcgccggtctttttgccgggacgtttcatgccttttgcgtccggcttttaagaatt
gatgggggcaagatcggcatcgagccaaactttgtgatttacgacgaggctgacagcctg
gcggtgatcaaaaaggcgatcaaaaacttaaagcttaatcccaaaacctacaaaccccga
ggggtgaaaagccttatttcccaggctaaaaacgagctgatttctgccgaggcttatccc
cagtacgcccggggcgagtggcaaaagggggtggcggagatttttttggagtaccaacgc
ttacttaaccgcttccgggcgcttgattttgacgatcttttaatgaaagcggtttacctg
cttaaaaaagaccaaccgacgcggcaaaaataccaagaccggtatcagtgggtactggtg
gatgaataccaagacaccaacaaggcccagtatgaactgactaaaatcttggcgggtaag
tggcgtaatttggcggcggtgggagatttttcccagtcgatttatgctttccggggggcg
gattaccgcaacatcaaccaattaaagcaggattttgccgacttgagacagataagttta
gaacaaaattatcgctcgacccagacgattttggacgcggctaccgcggtgattgccaaa
aatagcctccacccggtgttgaccttatggaccaaggcgggtttgggggcgaaggtaaag
atttttgaggcagacaacgaaaaagaagaagcaggttttatcgtcgccacgataaaaaac
gacccaggcagccatgcggttttataccgaaccaacgcccagtcccgggtaatcgaggag
gcgcttcttaaaaacggaatggcctacagcttggtgggcggggtgagattttacgcgaga
agagagatcaaggacctgacggcctacctaaggctaatcaacaaccccaaggatttagtc
agttaccaacggttggaaaagttggggaaaaggagtcttaaccggtttgttaactggctc
gaccagaaaaaaaatatcgacaagctgccgaccagaaaaattttggagcaggtggtcaaa
gtaaccggctatcttgaccggtttgacaaaaagaacgaggaagatctaaaccgcctggaa
aacatcgatgaattaaacagtgtggcggaagagtttaaggatttgggggcctttttagaa
aacgcagccttggtcgaggcggccgaccggccgacgctaaagggtaaagaaaaccacgag
ggagtaaccttgatgaccatgcacaactccaagggcctggagtttgatacggtgtttatg
atcggcatggaagagggacttttcccccactcgcggtctagtttcaacaaagaggatctc
gaggaagaacgccggctctgctacgtgggcatgactcgggctaagcggcagctttatttg
tcttatgcccggggccggttttattttggcagacgaaactacaatacggtcagccggttt
ttggccgatatcgacgagggcttgttggagtttgttaatcaggaatttgatattattact
tag
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integrated database retrieval system
