Microbacterium sp. BDGP8: P6897_03025
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Entry
P6897_03025 CDS
T11498
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mibd Microbacterium sp. BDGP8
Brite
KEGG Orthology (KO) [BR:
mibd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mibd03400
]
P6897_03025
Enzymes [BR:
mibd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
P6897_03025
DNA repair and recombination proteins [BR:
mibd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
P6897_03025
Prokaryotic type
P6897_03025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WHE36715
LinkDB
All DBs
Position
complement(643937..645301)
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AA seq
454 aa
AA seq
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MSSPSIVWFRDDLRLADHPALRAALDRGEPVVGLYVLDEESAGIRPLGGAARWWLHHSLA
SLADDLRAGGSHLVLRRGAAASVVRSLVDDIGAGAVYWNRRYGGAERAVDTDLKDGLRAD
GVEVESFAANVLFEPWTVKTGSGTPFSVFTPFWNAARNLPAPREPLPRPDEVPGLRSSPA
GDDLDDWELLPTRPDWAGGLRERWQPGEAAARARLREFLDDDLGTYDAARDEPSAGATSL
LSPRLRWGELSPHTVWHAGVETGGGTGAHATSASRFLSELGWREFASHTLYHFPDLATKN
WRRGFDAFAWPALDPAHLTAWEKGETGVPMVDAGMRELWHTGYMHNRVRMVTASFLTKNL
LIDWRLGEQWFWDTLVDADGASNAFNWQWVAGSGADASPYFRIFNPERQAEKFDPRGLYI
GQWAPDSAAREPIVDLAATRKAALQAYEAVKRAR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgccttcgatcgtctggttccgcgacgacctgcgcctggccgaccaccccgcg
ctgcgcgccgccctcgaccgcggggagcccgtcgtcggcctgtacgtgctcgacgaggag
tctgcgggcatccgcccgctcggcggcgccgcacggtggtggttgcaccactcgctcgca
tcgctcgccgacgatctgcgcgctggcgggtcgcatctcgtgctgcgccgcggagctgcg
gcatccgtcgtccggtcactcgtcgacgacatcggtgccggagccgtctactggaaccgc
cggtacggcggagccgagcgtgctgtcgacaccgacctgaaggacggtctgcgcgccgac
ggcgtcgaggtcgagtcgttcgcggcgaacgtgctgttcgagccgtggacggtgaagacc
gggagcggcactccgttctcggtgttcaccccgttctggaacgcggcacgcaacctgccc
gccccgcgtgagccgctcccccggccggacgaggtccccggcctgcgctcatcgcccgcc
ggcgacgacctcgacgattgggagctgctgcccacccggcccgactgggcgggcggtctg
cgcgagcgctggcagcccggcgaggcggcggcgcgcgcacgcctgcgcgagttcctcgac
gacgacctcggcacctacgacgcggcccgcgacgaacccagcgcgggagcgacctcgctg
ctctcgccgcgcctgcgatggggcgagctgagcccgcacaccgtctggcacgcaggagtc
gaaaccggcggcggcaccggcgcccatgcgacctccgcctcgcgcttcctctccgagctc
ggctggcgcgagtttgcgtcgcacacgctctaccacttccccgatctcgcgacgaagaac
tggcggagaggcttcgacgccttcgcctggccggccctcgaccccgcacacctgacggcg
tgggagaagggcgagaccggcgtgccgatggtggatgccgggatgcgcgagctctggcac
accggatacatgcacaaccgggtgcggatggtcacggcatcctttctcaccaagaacctg
ctcatcgactggcgactcggtgagcagtggttctgggacaccctcgtcgatgccgacggt
gccagcaacgccttcaactggcagtgggtcgcggggtcgggcgcggacgcgtcgccgtac
ttccgcatcttcaaccccgagcgccaggccgagaaattcgacccgagagggctctacatc
ggccagtgggcacccgacagcgccgcgcgcgagccgatcgtcgacctcgcggcgacccgc
aaggcggcgctgcaggcgtacgaggcggtgaagcgggcgcggtga
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