Microbacterium sp. BDGP8: P6897_04945
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Entry
P6897_04945 CDS
T11498
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mibd Microbacterium sp. BDGP8
Pathway
mibd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mibd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P6897_04945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mibd03019
]
P6897_04945
03016 Transfer RNA biogenesis [BR:
mibd03016
]
P6897_04945
Enzymes [BR:
mibd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P6897_04945
Messenger RNA biogenesis [BR:
mibd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P6897_04945
Transfer RNA biogenesis [BR:
mibd03016
]
Prokaryotic type
tRNA degradation factors
P6897_04945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RNase_PH_C
KH_KhpA-B
KH_NusA_1st
KH_PNO1_2nd
KH_2
Motif
Other DBs
NCBI-ProteinID:
WHE37068
LinkDB
All DBs
Position
1049681..1051960
Genome browser
AA seq
759 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVITVLSIAPGEYYDALAINAASASTQISGLPFSGPIAGVRLALVPGHGEHEDQWVVFPN
QKVVEEAVFDLTVAGRVLPDGEVAIMMVEAEATEGSWNLIKGGAVKPSEEVVAQGLEAAK
PFIKQLVEAQASMAASASREPGVYPVFPPYAPEVYDFVAERAYGELTSVYQIADKQERQN
ADDAIKDRVKGEVAAAVEAEQLPASALAEFSAAYKSVTKKIVRGRILSEGVRIDGRGLAD
IRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPTTSKRYLHHYNFP
PYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSV
CASTLSLLNAGVPLRAPVAGIAMGLVSDQVDGETRYAALTDILGAEDALGDMDFKVAGTS
EFVTAIQLDTKLDGIPSSVLSAALTQAKEARLTILGVLNAAIDSPDEMAPTAPRVISVQI
PVDKIGELIGPKGKTINSIQDETGADISIEEDGTVYIGATDGPSAEAARARVNAIANPTN
PEVGEQFLGTVVKIATFGAFISLLPGKDGLLHVSEVRKLAGGKRVENVEDVLGVGQKILV
RITKIDDRGKLSLEPVLEETADQDGSAAASEGPEAPAEG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtccagaaatcaccgcagccgaagccgtcctcgacaacggccgcttcggcacc
cgcaccgtccggttcgagaccggacgcctggcacagcaggcgcagggcgccgttgccgcc
tacctcgatgaggagacgatgctcctctcggccaccagcgccggaaagcacccgcgcgaa
ggcttcgacttcttcccgctcaccgtcgacgtcgaagagcgctcgtacgccgccggcaag
attcccggctcgttcttccgccgcgagggacgcccctcgaccgaggcgatcctcgtctgc
cgtctgatcgaccgcccgctgcgcccgtcgttcgtcgacggcctgcgcaacgaggtccag
atcgtcatcacggtcctctcgatcgcacccggcgagtactacgacgccctcgcgatcaac
gcggcatccgcttcgacgcagatctcgggcctgccgttctccggcccgatcgccggtgtt
cgcctggcgctcgttcccggtcacggtgagcacgaggaccagtgggtcgtcttcccgaac
cagaaggtcgtcgaagaggccgtcttcgacctcaccgtcgccggccgggtcctccccgac
ggcgaagtggccatcatgatggtcgaggccgaggcgaccgagggcagctggaacctcatc
aagggcggcgccgtcaagccgagcgaagaggtcgtcgcacagggcctcgaggccgccaag
cccttcatcaagcagctcgtcgaggcgcaggcttcgatggcggcatccgcgtcgcgtgag
ccgggcgtctaccccgtcttcccgccgtacgccccggaggtctacgacttcgtcgccgag
cgcgcctacggcgagctgacgagcgtctaccagatcgccgacaagcaggagcgccagaac
gccgacgacgcgatcaaggaccgcgtcaagggcgaggtcgccgctgccgtcgaggccgag
cagctcccggcgtccgcgctcgcggagttctccgccgcgtacaagtcggtcaccaagaag
atcgtccgcggccgcatcctcagcgagggcgtccgcatcgacggtcgcggcctggccgac
atccgtccgctcgacgccgaggtgcaggtcatcccgcgcgtccacggctcggcgatcttc
cagcgcggtgagacccagatcctgggcgtcaccacgctgaacatgctgaagatggagcag
cagatcgactcgctgtcgcccacgacaagcaagcgctacctgcaccactacaacttcccg
ccctactcgaccggtgagaccggccgcgtcggcagcccgaagcgtcgcgagatcgggcac
ggcttcctcgccgagcgcgcgctcgtgccggtgctgcccagccgcgaggagttcccgtac
gcgatccgtcaggtctccgaggccctcgggtcgaacggctcgacctcgatgggctcggtg
tgcgcctcgaccctctcgctgctgaacgccggtgtgcccctgcgcgccccggtcgccggt
atcgcgatgggtctcgtctccgaccaggtcgacggtgagacccgctacgcggcgctgacc
gacatcctcggcgccgaggacgcgctcggcgacatggacttcaaggtcgccggcacgagc
gagttcgtcacggccatccagctcgacacgaagctcgacggcatcccgtcgtcggtgctc
tcggccgcgctgacccaggccaaggaggctcgtctgacgatcctcggcgtcctcaacgcc
gcgatcgacagtcccgacgagatggcaccgaccgccccgcgcgtcatcagcgtccagatc
ccggtcgacaagatcggtgagctgatcggccccaagggcaagacgatcaactcgatccag
gacgagaccggcgccgacatctcgatcgaggaggacggcaccgtctacatcggcgcgacc
gacggcccctcggccgaggccgctcgtgcccgcgtgaacgcgatcgccaaccccaccaac
cccgaggtcggcgagcagttcctgggcaccgtggtgaagatcgcgacgttcggcgcgttc
atctcgctcctgcccggcaaggacggactgctgcacgtcagcgaggtccgcaagctcgcc
ggcggcaagcgcgtcgagaacgtcgaagacgtcctgggcgtcggccagaagatcctcgtg
cgcatcacgaagatcgacgaccgcggcaagctctccctcgagccggttctcgaagagacc
gctgaccaggacggctcggccgctgcgagcgagggccccgaggctcccgccgaaggctga
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