Microcystis sp. BLCC-F210: ACE3JL_04195
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Entry
ACE3JL_04195 CDS
T11209
Name
(GenBank) ribonuclease R family protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mibl Microcystis sp. BLCC-F210
Pathway
mibl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mibl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE3JL_04195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mibl03019
]
ACE3JL_04195
03016 Transfer RNA biogenesis [BR:
mibl03016
]
ACE3JL_04195
Enzymes [BR:
mibl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ACE3JL_04195
Messenger RNA biogenesis [BR:
mibl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACE3JL_04195
Transfer RNA biogenesis [BR:
mibl03016
]
Prokaryotic type
tRNA degradation factors
ACE3JL_04195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_HELZ2
OB_cyt-4
OB_RNR_1st
DUF5817_CT
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
XHB70790
LinkDB
All DBs
Position
853884..856136
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AA seq
750 aa
AA seq
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MDFSIATLLSHLSDDKLATGKLLEKKLGCEDDPESCEKLQVILDALERLGMVVKERGRYR
RVIEENIVEAKLRCSSKEFCFAIQDIEDADDIYVSKNHLSNAWNGDRVLVKIIREGTRRR
SPEGEVRLILERANPSLLAQVKQENEQFVAVPLDDRLKFTLNLLENGQNLQENIDHLVHV
SVLRYPLGEMPPIGKVTRILGSTAEAAADTDIVSCKHDLPHNFPPEALEIADNLADFFDS
GEKEQLRDLTPLFTFTIEDDTPLDYPPIIENAFSLEKINQNRWQVAIHISDVTRYIERGG
LLDKVAKKRGTAVYLGEKVLPLVPAAVTSRCSLSPQEQRPAISILVTLDDKGELVEYEIT
RSLIQVDQHFTYQQVRDLLSEEDSAAAPTDTVETLKDLFFSVCPTLKSQRLQRGSFDIQL
DKISPYKDEGRGGTVLASNNLPARSLLTEVAILAGKVVAEHLQALKLPCIYCGQSEPDWD
ELEDLLKLANNLGAELNLTAEEEIKPNDYQNLTRTFSASSSVKVLNYLLQETLKLVRYSS
HPLPHFGLAYPSNYTHCLSPLQRYADLWVQRVLKLLLTEGKDRRSKIVKVGVNLGSNSCH
GQINWNILPSQIQEELEEESHLIVSHLNDRSKIAEDAEKDLEGLKKAEKMKERMGQVFRG
LITGVQSYGFFVEISDLLVEGLVHVSSLKDDWYEYRARHSCLVGRKNRVAYRLGDEVEVE
VKDVDYYRQQIDLVTVSGGSSASYDDLEED
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcgatcgccacactcctctctcatcttagtgatgataaattagctacgggt
aaacttctcgaaaaaaaattaggatgcgaagacgatcccgaaagctgcgaaaaattgcaa
gtgattctcgatgctttggaacgtctgggaatggttgtcaaagaacgggggcgttatcgt
cgtgtgatcgaggaaaatatcgtagaagcaaagctgcgctgttccagtaaagaattttgc
tttgctatccaagatatcgaagatgctgatgacatctacgtctcgaaaaatcatctcagt
aacgcttggaatggcgatcgagttttagtcaaaatcatccgtgagggaacccgtcgtcgt
tccccagaaggagaggtgagattaattctcgaacgagctaatccttcgcttctagcgcaa
gtaaaacaggaaaatgagcagtttgtggcggttcccctcgatgatcgcctgaaatttacg
cttaatctcctcgaaaatggtcaaaatctccaagaaaatatcgatcacctcgttcatgtt
tccgtcctccgttatcccctaggggaaatgcctcccatcggtaaagttactcgcattctc
ggttccacggccgaggccgctgccgacacagatatcgtctcctgtaaacacgatctaccc
cataattttccgccagaagcccttgaaattgccgataatttagcagatttcttcgatagt
ggcgaaaaagaacaactgcgagatttaactccactcttcacctttaccatcgaagatgac
acccccctggattatcccccaatcattgaaaatgccttttctttagagaaaatcaaccaa
aatcgctggcaagtcgccattcatattagcgatgtcacccgttacatcgaacggggcgga
ttattggataaagttgccaaaaaacggggaactgctgtctatttaggcgaaaaagtgctg
ccattagtcccggctgccgttaccagtcgttgttccctgtcaccccaagaacagcgcccc
gctatttctatcctcgtcaccctcgatgataagggggagctagtggagtacgaaatcacc
cgcagcctcatccaagtggatcaacattttacctatcaacaggtgcgcgatctgctcagt
gaagaagatagcgcagctgcccccaccgataccgttgaaaccctgaaagatttatttttc
agcgtttgccccaccctaaaatcccaacgtctgcagcggggtagttttgatattcaatta
gacaaaatctctccctacaaagacgaaggacggggggggactgttctcgcttctaataat
ttaccggcccgttctttactgacagaagtggcaattttagccggcaaagttgtcgctgaa
catttacaggccttaaaattgccctgtatctactgtggacaatcggaaccggattgggat
gaattggaggatttactcaaattagccaataatttaggggcagaattaaatttaactgcc
gaggaggagattaaacccaatgactatcaaaatctcacccgcactttttccgcttcttca
tcggtgaaagtcctcaattatctcctgcaagaaactctcaaattagttagatatagcagc
catcctctaccccattttggtttggcctatcctagcaattatacccactgtctctccccc
ctacaaagatatgccgatctttgggtacaacgggtgttaaaactcctactaaccgagggg
aaagatcgccgcagcaaaatcgtcaaagttggggttaatttgggcagtaatagctgtcat
ggacagattaattggaatattctcccaagtcaaattcaggaggagttagaagaggaaagc
catctaattgtttcccatctcaatgatcgctcaaaaattgctgaagatgcggaaaaagac
ctagaaggattgaaaaaagccgagaaaatgaaagaaagaatgggtcaagtttttcgcggc
ttaattaccggtgtacaatcctatggtttcttcgtggaaatttccgatttattagtggaa
gggttggtccatgtttcttctctcaaggatgattggtacgaatatcgcgcccgtcatagc
tgtttggtaggacggaaaaatcgcgttgcctatcgtctcggtgatgaggtagaagtggag
gtaaaagatgtagactattatcgtcagcaaatcgatctagttacggttagcggtggcagt
tcagcaagttatgacgacttagaagaagattaa
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