Microcystis sp. BLCC-F210: ACE3JL_07115
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Entry
ACE3JL_07115 CDS
T11209
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mibl Microcystis sp. BLCC-F210
Pathway
mibl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mibl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACE3JL_07115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mibl03021
]
ACE3JL_07115
03400 DNA repair and recombination proteins [BR:
mibl03400
]
ACE3JL_07115
Enzymes [BR:
mibl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACE3JL_07115
Transcription machinery [BR:
mibl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACE3JL_07115
DNA repair and recombination proteins [BR:
mibl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACE3JL_07115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
XHB71302
LinkDB
All DBs
Position
complement(1492176..1494056)
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AA seq
626 aa
AA seq
DB search
MKTPTDQRFDYVKIGLASPERIRQWGERNLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
KIFGPSKDWECWCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVTHVWYLKG
IPSYLSILLDMPLRDVEQIVYFNAYVVLDPGNAGNLSYKQLLSEDQWLEIEEEIYAEDSE
LVGIEVGIGAEAIQRLLQEINLEEEAERLRTEIVESKGQKRAKLIKRLRVIDNFVATGSQ
AEWMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLSRLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIYQCGLPREMAIELFQPFVIHRLIKLGIVNNIKAAKKMIQRGDANVWHVLD
EVITGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHIPLS
LEAQSEARLLMLACHNILSPATGRPIVAPSQDMVLGCYYLTAENPKAQKGGGRYFASMDD
AIRSFDQGLVDLHASVWLRLPVGEKVKTNKPDEEVLETETLPDGSIWKYYRERKTREKDG
QIIAQYVRTTVGRIIYNKTILEALVV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaagactccaacagatcaaagatttgattacgtcaaaatcggtttagcgtcccccgaa
agaattcggcaatggggagaaagaaacctgcctaacggtcaagtcgtcggagaagtaacc
aaaccagaaacgatcaactatcggactctcaaaccggaaatggatgggttattctgcgag
aaaatttttggcccctcgaaggactgggaatgttggtgcggtaaatacaaacgcgtccgt
caccggggaattgtctgtgaacgttgcggggtggaagtcaccgagtcccgggtacgtcgt
catcgcatgggttttatcaaactggctgcccccgtcacccacgtttggtatctcaaaggt
attcccagttatctcagtatcctgctcgatatgcccctgcgggacgtggagcaaatcgtc
tattttaatgcctatgtggttctcgatccgggcaatgccggcaatcttagttataaacaa
ctcctcagcgaagatcaatggttagagatcgaagaagaaatctacgcggaggattcggaa
ttagtcggtattgaagtgggtatcggggccgaggctatccaaagactcttacaggaaatt
aacctggaagaagaagcggaaagactgcggacggaaattgtcgaaagtaaagggcaaaaa
cgggcaaaattaattaaacgtctccgggtaatcgataactttgtcgccacgggttctcag
gcagaatggatggttttaaccgtaattcccgtgattccccccgatttacgcccgatggtg
cagttggacggcggccgttttgccacctctgacctgaacgatctctaccgtcgggtgatt
aaccgcaataaccgtttatcccgtctgcaagaaattctcgctcccgaaattatcgtccgc
aacgaaaaacggatgttacaggaggccgtcgatgctttaattgataacggtcgtcgcggt
cgcacggtggtgggggccaataatcgcgccctgaagtctttatcggatattatcgagggt
aaacaggggcgtttccgtcaaaatctcctcggcaaacgggtggactattcgggacgttcg
gttatcgttgtcggtccgaaattgaagatctatcaatgcggtttaccccgggaaatggcg
atcgaattgttccaacccttcgttatccatcgtttaattaaattaggcatcgtcaataat
atcaaggcagccaagaaaatgatccaacggggggatgctaatgtttggcacgtcttggat
gaagtaatcacgggacacccggtgatgttaaatcgcgcccctaccctgcaccgtttgggc
attcaagcgtttgaaccgatcctagtggagggccgggcgattcagttacatcccctcgtc
tgtcccgcttttaacgctgactttgacggggaccaaatggccgtacatattcccctctcc
ctggaagcacaatcggaagcgcgattgttgatgttagcttgtcataatattctctcaccg
gcgaccggtcgcccgattgttgccccttctcaggatatggttttgggttgttattatctc
acggccgaaaatcccaaggcccaaaagggtgggggtcgttatttcgccagcatggatgac
gctattcgctcttttgatcagggattggtggatctgcacgcttctgtgtggttgcgttta
ccggtgggagaaaaggtgaaaaccaataaacccgatgaggaagtcctggaaacggaaact
ctccccgatggcagcatctggaaatattatcgggaacgcaaaacccgcgagaaggatggt
cagataattgctcagtatgtgcgtactacagtggggcgaattatctacaataagacgatt
ctagaagctttggtggtctag
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