Microcystis sp. BLCC-F210: ACE3JL_16465
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Entry
ACE3JL_16465 CDS
T11209
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mibl Microcystis sp. BLCC-F210
Pathway
mibl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mibl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE3JL_16465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mibl03019
]
ACE3JL_16465
03009 Ribosome biogenesis [BR:
mibl03009
]
ACE3JL_16465
Enzymes [BR:
mibl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACE3JL_16465
Messenger RNA biogenesis [BR:
mibl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE3JL_16465
Ribosome biogenesis [BR:
mibl03009
]
Prokaryotic type
rRNA helicases
ACE3JL_16465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
HEM4
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
XHB68727
LinkDB
All DBs
Position
complement(3423167..3424606)
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AA seq
479 aa
AA seq
DB search
MTTGFNNLGLSDSRLQHLETLGFTTPTEIQTKAIPLLLEGHDMVGMSQTGTGKTAAYSLP
LLERMDTKNPNVQALILTPTRELAQQVASAIKDFSDDRRLFILTVCGGQSMERQIRSLEK
GVQIVVGTPGRVIDLLDRKKLHLESLNWVVLDEADEMLSMGFIDDVKKILQASPSTRQTA
CFSATMPREIRDLIANFLKSPISVTVSQTQAAPAKIEQKIYMIPRGWTKLKVLQPLLEIE
PLESAIIFVRTKQTAAELTSKLQEAGQTVDEYHGNLSQVQRERLVQRFREGKIKLVVATD
IAARGLDVENLSHVINYDLPDNAETYIHRIGRTGRAGKTGTAISLVEPIDRRLLRQIEQR
LRQRLESSPIPSRTEVEAKRLTKLQNQLKEALSGERMASFLPLVRDLSEEYDPQAIAAAA
LQMIYDQNCPQWMKTDWEVPAATSSKPVINKTPRSGGSKYPSKSNNRPSLDKKIVFQER
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccactggtttcaacaatttaggtttatccgatagccgtcttcaacacctagaaacg
cttggattcaccacccccacggaaattcaaaccaaagccatccctctccttctagaaggg
catgacatggtaggaatgtcacaaacgggaaccggcaaaactgccgcctattccctgcct
ttactggaacgcatggacaccaaaaatcctaacgttcaagctttaatcctcacccccacc
cgggaattagcccaacaggtggccagcgccatcaaagatttctctgatgaccgtcgtctc
tttatcctgacagtctgtggtggtcaatccatggaacgtcagatccgcagtctggaaaaa
ggtgtccagattgtggtcggcactcccggccgggtaattgatctgctcgatcgcaaaaaa
ctccatctcgaatccttaaactgggtagtcctcgatgaagcggacgaaatgctcagtatg
ggttttatcgatgatgttaagaaaattctgcaagcatccccctccacccgtcaaaccgcc
tgtttctcggccactatgccccgggaaatccgcgatttaatcgctaatttcttgaaatct
cccatttctgtgacggtttctcaaacccaggccgctcctgctaaaatcgaacagaaaatt
tatatgatccctcgcggttggacgaaattaaaagtcctgcaacccctgttagagatcgaa
cccctagaatcggcgattattttcgtccgcaccaagcaaaccgcagccgaattaaccagc
aaactgcaagaagcggggcaaacggtggatgaataccacggtaacttaagccaagtgcaa
cgggaacgactggtgcaacgtttccgcgagggcaaaattaaattagtggtagccacggat
atcgcggcccgcggtctagatgtagaaaatctcagccacgttattaactatgatctgccg
gataacgccgaaacctatattcaccgcattggccgcaccggccgcgccggtaaaacggga
actgctatatctttagtagaaccgatcgatcggcgtttattacgtcagattgaacagcgt
ttgcgtcaacgtctggaatctagtcccattcctagtcgcaccgaagtggaagcaaaacgc
ctgaccaagctgcaaaatcagctaaaagaggctttatcgggggaacggatggcttctttc
ttgcctttagtgcgggatttaagtgaagaatacgatccccaagcgatcgcggctgctgcc
ctgcaaatgatctacgatcaaaattgtccccagtggatgaaaactgattgggaagttccc
gcagcgacgagcagtaaaccggtgattaataaaactccccgcagtggtggtagtaagtac
ccctctaagtcgaataaccgtccttccctggacaaaaaaatcgtctttcaagaacgttaa
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