Allocoleopsis franciscana: Mic7113_0085
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Entry
Mic7113_0085 CDS
T02374
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
mic
Allocoleopsis franciscana
Brite
KEGG Orthology (KO) [BR:
mic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mic03021
]
Mic7113_0085
Transcription machinery [BR:
mic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mic7113_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_24
HTH_3
MarR_2
Sigma70_ECF
HTH_23
HTH_17
UPF0122
HTH_Tnp_ISL3
FGAR-AT_linker
HTH_Crp_2
HTH_11
KORA
HTH_8
GerE
HTH_30
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AFZ16025
UniProt:
K9W6N4
LinkDB
All DBs
Position
complement(89508..90284)
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AA seq
258 aa
AA seq
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MSTSTTHELKHESLQLLREYQQTGSSEIRNRLVHLNFGLVRKEAHHWVNQCTESYEDLLQ
VGCLGLIRAVERFDTTKGSAFSSFAIPYIRGEIQHYLRDRGCSVRIPRRWLALRQQSVEL
IQELRVKLNRQPTDSEIALALEISLAEWQEIKLAHQNREPLSLDTPVGDAEEGTSSLGEL
VPDPRYRSFQLAQEDQIRLQQALALLEKRTRDVLEFVFLHDLTQKEVAERLDISVVTVSR
RVKKGLDALKKFMSGAEH
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctctaccacccatgaactgaagcacgagagcctacaattattgcgggagtac
cagcagaccggctcatcagagattcgcaaccgactcgttcacctcaatttcggactggtt
agaaaagaggctcatcactgggtcaatcagtgtaccgaaagttatgaagatttacttcaa
gtaggctgtcttggcttaattcgtgctgttgaacggtttgacacaaccaaaggaagtgct
tttagctcctttgcgattccttacatccgtggggaaattcagcactatttgcgcgatcgc
ggttgctcggttcgcattcctcgacgctggctggcgctacggcaacagtctgtggaactg
attcaagaattacgggtaaaacttaatcgacagccgaccgattctgaaatcgccttagca
ctagagatttctcttgctgaatggcaagaaattaagctagctcaccaaaatcgcgaaccg
ctaagtttggatacaccggtgggagacgccgaagagggaacttccagcttaggtgaactg
gtccccgatccgcgctatcgcagttttcagttagcccaagaagatcaaattcgcctgcaa
caagctttggcgctcctggaaaaacggactcgtgatgttctagaatttgtttttttacac
gacttgactcaaaaagaggtggcagaacgcctggacattagcgtcgtgacggtctcccgg
cgtgtgaaaaaaggactagatgccctgaaaaaattcatgagtggagcagagcattaa
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