Allocoleopsis franciscana: Mic7113_0358
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Entry
Mic7113_0358 CDS
T02374
Name
(GenBank) RNA polymerase sigma factor, cyanobacterial RpoD-like family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mic
Allocoleopsis franciscana
Brite
KEGG Orthology (KO) [BR:
mic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mic03021
]
Mic7113_0358
Transcription machinery [BR:
mic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mic7113_0358
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Replicase
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AFZ16280
UniProt:
K9W7B6
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All DBs
Position
406583..407566
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AA seq
327 aa
AA seq
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MPTANTKTKTTKPTFSADMVRTYLHEIGRVPLLTHEQEIVYGKQVQQMMLLMDAKAALAE
KLQREPTTKEWTMHVKHDEATLNKIVSQGTWAKRKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPTKGYKFSTYAYWWIRQAITRAIAQQARAIRLPIHITEKLNKI
KKVQRELSQKFGRNATPAEIGQELDLEPAQIREYLSIARQPVSLDVRVGDNQDTELSDLL
EDDGQTPVNYTTQESLRQDLDDLLAELTPQQREVLALRFGLEDGNELSLAKVGQRLNLSR
ERVRQLEHQALAQLRRRHANFREYIAS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgctaacacgaaaacaaaaacgaccaagcccacgttctcagcagatatggtg
cggacttatctccatgagattggtcgcgtgcctctgctgacccatgagcaagaaattgtc
tatgggaagcaggttcagcaaatgatgttgctcatggatgccaaggcagccttggctgaa
aagttgcagcgcgaaccgaccaccaaagagtggacgatgcacgtcaaacatgatgaagcc
acacttaataaaattgtaagccagggaacatgggccaagcgcaagatgattgaagcgaac
ttgcgtctagttgtggcgatcgctaaaaagtaccaaaagcgtaatatggaatttctggac
ttaatccaggaaggaaccttaggcttagagcgaggtgtagagaaatttgaccccaccaaa
ggctacaagttttccacctatgcttactggtggattcgtcaggccattacccgcgctata
gctcagcaagctcgtgcgattcggttgcccatccacattaccgaaaagctcaacaaaatc
aaaaaagtccaacgggaactctctcagaagtttggtcgcaacgccacacctgccgagatt
ggtcaggagttagatttagaaccagctcagattcgtgaatacttgagtatcgctcgtcaa
cccgtctctctcgatgttcgcgtgggagataatcaggacactgagctgtctgacctttta
gaggatgatggtcaaactccggtgaattacaccactcaggagtcactgcgccaagatttg
gatgacctcctcgccgaactcacccctcagcaacgagaagtcttagcactgcgctttggc
ttagaagatggcaacgaactatctctagctaaggttggtcaacgactcaacctgagccgt
gagcgagtccgtcagttagaacaccaagctttagcacagttacggcgtcgccacgccaac
ttccgggagtatatcgccagctag
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