Allocoleopsis franciscana: Mic7113_1726
Help
Entry
Mic7113_1726 CDS
T02374
Name
(GenBank) PAS domain S-box
Organism
mic
Allocoleopsis franciscana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
PAS
PAS_8
HisKA_3
GAF_2
GAF
HATPase_c
PAS_3
HATPase_c_2
GAF_3
PAS_7
Mac
Motif
Other DBs
NCBI-ProteinID:
AFZ17589
UniProt:
K9WCX8
LinkDB
All DBs
Position
1986135..1990859
Genome browser
AA seq
1574 aa
AA seq
DB search
MAIVCEKSPKAIFQDLLEAIQSGLIQPLSELDEDLLVQEYKFLHDRVQQAAYALIDESQK
QVVHLQIGGNLLEKTSPEQRSDRLFEIIDHLNQGIELVTAQPERTEIARLNLIAGQKAKA
ATAYEAAFKYFTTGIQLLNPESWQSEYDLTLALYSEAAEAAYLHGCFDEMEQFVEVVLVH
AKTVVDKVQVYDSRIQRHLSQGNLKEALKIGLEVLKLLGVILPENPSELDVRGGLESTAA
LLAEREIEDLINLPEMTAPEPLAAMSILASIGATAFIVSTALQVLIACKMVNLSLDYGNS
TWSPMSYAAYGVVLCGVVKDIELGYKFGKLALGSLERLNTKKRDAKAFVVSVALIMHWKV
HLRNTIPMLIDAYQNGVDTGDFEFAGYAACDVCYNSFFVGEELTQLEQKTATYSKAVDRI
RRESPSTWIAIVWQTILNLLDRSENPSRLVGRVCNEEQALPHALEVKDGTAIQMLYLHKV
ILCYLFEEYHQAVQSAILARQHFEEVTATKVLPVFCFYHSLAFLSLSLDASNSEKVAWLN
CVNTNQEKMQKWAEHAPMNYLHKFYLVEAEKARVLGQFLEAEEFYERAIAGAAENEYIQE
EALAYELAAKHYLARGREKIAQTYMKEAHYCYSRWGAIAKVKDLEKRYPQFFCQSSRAAS
ASVPITAETISNSFHTAFDLAAVMKASQAISREIELKQLLRSLMQILIENAGAQTGYLIL
ENSGEWSIEAACELNAEENACATQVLQSTPIAAQLPESIIQYVIRTLKPVTLNDATREDA
FINEPYIQQNQPQSIFCLPLLNQAKLVGVLYLENRLAAGVFTPERSQVLQLLSTQAAIAI
ENANLYSELRAKESKITQFLEAIPVGIGIVDATGRLYYTNQCGNQLVGKETDPSIAPEQI
SEAYQLYVAGTDQVYPAESLPIVQALKGERIRTEDIEIRRDHVSILLEARGTPVFDQQGN
IIYAIATFQDITERKQAEKLLADYNCTLEQQVAERTAALRQSEANYRNLLQTANSVIVRY
DPQGRIHYINDYGVKLLGYEEHEILGRTLFETILPDIELSGRDMKPFVHDLLRNPQSYPR
GEGENLCRDGRRVWMEWSNQAIFNDQGDVVEILSVGNDTTQRRQAEEALQRSEAKFRAIF
ANSQVGIYRTRIGDGLILDANQRFAELFGFDSPQEMIGIEHTIGYWVNPSDRQRGIEVMK
RDGEVRSFEAQLQKRDGTVFWGLFSSYLNAGDDYIEGVLADISDRKQAEAALQVSESKLR
TLIEAIPDPLFVFSAEGRFLEIMVLEPNLLWQPFEEMIGKTMHQLGREEADEFLGYIQQV
LRTQQILTVEYGAFLNGREMWFSARIAPISHDQVIWLVRDITAQKQAEATSILEERNRMA
REIHDTLAQSFTGILAQVGAAKQVLTDDLEATGAHLDLIKELARTGLTEARRSVVALRPQ
LLEEGSLQSALHRLVAQVRAAAMDTTLYYEIEGAVYALPSEVESNLLRIGQEALTNAIRH
AHADEIRVELVYKYDQFLLRVKDNGQGFGVGSIPSSEGFGLLGMSERAERIGAQLTIRSQ
PGHGTEIIVTIDRE
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
ttggcgatcgtttgcgaaaaatcaccgaaagcaattttccaggatttattagaagcaata
caatctggattaattcaacctttgtctgaattggacgaagacttgttggttcaagagtat
aagtttctgcacgatcgcgttcagcaagcggcttatgctttgattgatgaatcgcagaaa
caagtggttcatctccaaatcggtggcaatttgctcgaaaaaacttcaccagagcaacga
tccgatcggttgtttgaaatcatcgatcatctcaatcagggaattgagctagtcactgct
caaccagaacgaactgaaattgccagattgaatttaatagcaggtcagaaagcgaaggca
gcaacggcttatgaagccgcgtttaagtatttcactacagggattcaacttctcaatcca
gagagttggcagagtgagtatgaccttactttagcgctgtactcagaagcagcagaagca
gcatatcttcatggttgctttgatgagatggaacaattcgtagaagtggtactcgttcac
gctaagacagtggttgacaaagtgcaggtttacgacagcagaattcaaagacatttgtca
cagggcaacctgaaagaagcacttaaaattggattggaagtgttaaagcttctgggagtg
attttaccagaaaatccaagtgagttagatgttcgaggcggattggagtcaacggctgca
ctactcgctgaacgagaaattgaagacttgattaatttaccagagatgactgcaccagaa
ccgctagcagcaatgtcaatcctagcgagtattggagcgactgcgtttatagtttcgaca
gcactacaggtacttattgcgtgcaaaatggtaaatttatcgctcgactacggcaattct
acctggtcaccaatgagttatgctgcctatggagttgttctatgtggagttgttaaagac
attgaacttggttataaatttggcaaattggctctcggttcgctagaacgattgaatacc
aaaaaaagggatgctaaagcatttgtggtatcggttgccctaatcatgcactggaaagtg
catcttaggaacacaatacccatgctgattgatgcttatcaaaacggagtggacactgga
gactttgaattcgctggctatgctgcatgtgacgtgtgctacaactcgtttttcgtcggt
gaggaactcacccaactggaacagaaaacggcaacatacagcaaagcagttgatcgaatc
agacgggaaagcccctcgacttggattgcaatagtgtggcagaccattcttaatttgcta
gacaggtctgagaatcccagtcgcttagttggtcgagtgtgtaatgaagagcaggcatta
ccacacgcccttgaagttaaagatggaactgcaattcaaatgctatatctgcacaaagtt
atactgtgttatctatttgaagaatatcatcaagctgtacagagtgctattctggcaagg
caacattttgaagaagtgacagcaacaaaggttttacctgtattctgtttctatcattct
ctagcgtttttgagtctatcgctcgatgcttcaaactctgaaaaagtagcttggctaaac
tgtgttaacaccaaccaagaaaagatgcagaaatgggcagaacacgccccaatgaattat
ctacataaattttatctagtcgaggcagagaaagcgcgagtcttagggcaatttcttgag
gctgaagagttttatgaacgggcgatcgcaggtgctgctgaaaatgagtatatccaggag
gaagcattagcttatgaattagcggctaagcattatctagcgcgaggtcgagagaaaatt
gctcaaacttatatgaaagaggcgcactattgctatagtcgctggggcgcgatcgctaaa
gttaaagacttagaaaaacgctatccacagttcttttgtcagtcgtctagagccgcttcc
gcatcagttcctattactgctgaaactatctctaattccttccatactgctttcgattta
gcagcagtgatgaaagcttcacaggcgatttctcgtgaaattgaactgaagcaattgctg
cgatcgctgatgcaaattttaattgagaatgctggcgcacaaaccggatatctgatttta
gaaaactcaggagaatggtcgattgaagcggcttgtgaactcaatgccgaggagaatgct
tgtgcgactcaggtgttacagtctactccaattgccgctcaattgccagaatcaatcatt
caatatgtgattcggactctgaagcctgtcaccttaaatgatgcgactcgtgaagatgct
tttattaatgagccatacattcaacagaaccagcctcaatctattttctgtttgccgctg
ctgaatcaagccaagctggtcggtgtattgtatttagaaaatcggttagccgctggagta
tttacaccagagcgatcgcaagtcttgcagctattatcgactcaagccgcaatcgccatc
gaaaatgccaacctttactcagaactgcgggctaaggaaagcaagatcacccagttcctc
gaagcgattccggtgggaattgggatcgtggatgcgacgggtcgcctttactataccaac
caatgcggcaatcaactcgtgggcaaagagactgatccttccatcgcaccagagcagatc
tcagaggcttatcagctttatgtagcgggaacggatcaagtctatccagcggagagcttg
cctattgtgcaggcattaaagggcgaacgcatcaggactgaagatatagaaattcgtcga
gatcatgtctcaattctacttgaggcacggggaacaccagtttttgatcaacagggcaat
atcatttatgcgatcgctacctttcaggacattacggagcgcaaacaagccgagaaactc
ctagctgactacaactgcactttagagcaacaggttgcagaacgaactgctgcgttacga
caaagtgaggctaattaccgcaacctgctacaaaccgcgaattcagtcatcgttcgctat
gatccgcaaggacggattcactacatcaacgattatggggtaaaacttctgggctatgaa
gaacatgagattttagggcgaaccttatttgaaaccatccttccagatatcgaactctct
ggacgcgatatgaaaccctttgtccatgatttacttcgtaatcctcaatcgtacccgcga
ggtgagggtgaaaatttgtgtcgagatggtcggcgagtttggatggagtggtcgaatcaa
gccattttcaatgaccagggagatgtcgttgaaatcttatcggtgggcaacgacaccacc
cagcgtagacaagcagaagaggcattacaacgcagtgaagccaagttccgagctatcttt
gcaaactcccaggttggcatctaccgcacccgcatcggtgatggattaattcttgatgcc
aatcaacgctttgcagaactgtttggctttgattcaccccaagagatgattggaattgaa
cacactataggctattgggtcaatcccagcgatcgccaacgaggcattgaagtgatgaag
cgggatggggaagtgcgaagctttgaagcacagttgcaaaaacgagatgggacagtgttt
tggggacttttctcttcctatctgaatgcaggcgatgactacatcgaaggggtgcttgca
gatattagcgatcgcaaacaagcagaagcagccctacaagtctcagagtcaaagctacgg
actctaattgaggcaattcccgatccattgtttgtattctctgctgaagggcgattcctt
gaaataatggtactggaaccaaatctgctatggcaaccctttgaggagatgattggtaaa
actatgcatcaactcggaagggaagaagctgatgagtttctaggttatattcagcaggta
ctgagaacccaacaaatcctcacggtcgagtatggtgcgtttctaaatggacgagaaatg
tggttttcggctcgcattgccccaatcagccacgatcaggtgatttggctggtgcgagat
attacggcgcagaagcaagcagaagccacctcgattctggaagagcgtaaccgcatggca
cgcgaaattcacgacacactcgctcagtcgtttacgggcattctggctcaggtgggagcg
gcgaaacaggtgctaacggatgatttagaagcaactggggcacatctcgatctgatcaaa
gaattggcgcgaactggactgactgaagcgcggcgatcggttgtcgcgctccgtcctcag
cttttggaggaaggcagtttacaaagtgctctccatcgtctcgtcgctcaggttagagct
gccgcaatggataccactttgtactatgagattgagggtgcagtgtatgctctacccagc
gaagtcgagagtaacctactgcggattgggcaggaagccttaaccaatgcgattagacac
gcccatgctgacgaaattcgagtggagctagtctacaagtatgatcagtttttgttgcgc
gtaaaagacaatggacagggctttggagtgggcagtattccctcctctgagggctttggc
ttactcggcatgagcgagcgggcagagcgcatcggtgcacaactcacgattcggagtcaa
cccggacacggaacagagattattgtcaccatcgatcgggagtaa
DBGET
integrated database retrieval system
