Allocoleopsis franciscana: Mic7113_2601
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Entry
Mic7113_2601 CDS
T02374
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mic
Allocoleopsis franciscana
Pathway
mic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mic7113_2601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mic03019
]
Mic7113_2601
Enzymes [BR:
mic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mic7113_2601
Messenger RNA biogenesis [BR:
mic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mic7113_2601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Cas3-like_C_2
Utp25_C
UvrD-helicase
AAA_22
HEM4
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AFZ18393
UniProt:
K9WDT1
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All DBs
Position
2989529..2990830
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AA seq
433 aa
AA seq
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MTFRNLGLSTDLLRAVADSGYTEPTPIQQQAIPAVLQGKDVFASAQTGTGKTAGFTLPLL
QLLNTTNPNKVHRTPRALILTPTRELADQVNDSVKTYGKYLSLRSAVVYGGVGIKAQIQT
LRRGVDILVATPGRLLDHVGQKTVDLSQVEILVLDECDRMLDMGFIRDIRKILAILPSSR
QTLMFSATFSKPIQQLANTLLKSPTQIEVAPRNTAAQQVEQVVHPVDRDRKRELLSYMIG
FHNWKQVLVFTRTKHGANRLAEQLAKDGLKSTAIHGNKSQAARTRALQDFKQGKVRVLVA
TDVASRGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGNEGRAVSLVCGDEYPFLKDIE
RLLNQTLAKEVIPGYEPTSKSQPGADQPTKPQRSNQRRSNRAKSQTPSKPTRTQKPIKSG
TPARKRRPTASSV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcgtaacctcggtctttcgaccgacttgcttcgtgctgttgctgactctggc
tacacggagccaaccccgattcagcagcaggccattcccgccgtcctgcaaggaaaagac
gttttcgccagtgcccaaactggaacaggtaagacagcaggctttaccctgcctctactg
caactcctgaacaccaccaaccccaacaaggtacatcgcacgcctcgcgccctcatcctc
acccccactcgtgaactggcagatcaggttaacgatagcgtcaaaacctatggcaaatac
ctgtccctgcgctcggcagtcgtttatggtggcgtcggaattaaagcacaaattcaaaca
ctgcgccggggagttgatattctagtcgccacgccgggacggttactcgaccacgttggg
caaaagactgtcgatctctctcaagtggagatactggtgctggatgaatgcgatcgcatg
ttagacatgggcttcatccgcgacatccgcaaaatattggcaattctcccctcatcccgg
caaacgctgatgttctctgccacattctctaaaccgattcagcagcttgccaacaccctg
ctcaagtctcccactcagatcgaagtggctccccgtaatactgccgcacagcaagtggaa
caggtggttcatcctgtcgatcgcgatcgcaagcgagaactgctttcttatatgatcggc
ttccataactggaaacaggtgctagtcttcacccgcacaaaacacggagccaaccgtctt
gccgagcagcttgctaaagatgggctgaaaagcactgccattcatggcaacaaaagtcaa
gccgcccgcacccgcgccctgcaagactttaagcaagggaaagtgcgggtattagtcgcc
accgacgtagcctcacggggtctagatatcgatcagctccctcacgtagttaactatgaa
ctgcccaatgtcccagaagactacgtgcatcgcattggtcgcacaggtcgcgctggaaac
gaagggcgagccgtttccctggtctgtggcgatgaatatccattcttaaaggatatcgaa
cggttgctcaatcaaacccttgccaaggaagtgattccaggatacgagccaacctcaaaa
tcccagcctggggcagaccagccgacgaagcctcagcgatcgaatcaacgtcgcagtaat
cgtgcaaagtcccagacaccatccaaacccacccgcacccaaaagcccataaaatcaggg
actccggctcggaaacgacgacccactgcctcatcggtttga
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