Allocoleopsis franciscana: Mic7113_5548
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Entry
Mic7113_5548 CDS
T02374
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mic
Allocoleopsis franciscana
Pathway
mic00900
Terpenoid backbone biosynthesis
mic01100
Metabolic pathways
mic01110
Biosynthesis of secondary metabolites
Module
mic_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
mic00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Mic7113_5548
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mic01006
]
Mic7113_5548
Enzymes [BR:
mic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Mic7113_5548
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Mic7113_5548
2.5.1.29 geranylgeranyl diphosphate synthase
Mic7113_5548
Prenyltransferases [BR:
mic01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Mic7113_5548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFZ21180
UniProt:
K9WLA1
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All DBs
Position
complement(6488177..6489763)
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AA seq
528 aa
AA seq
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MLAIFLFILYFCFSAWLMYDHKQKIGIQIQEELPKKVIKITTATPKKQQKNKPVLAVEVN
LANSIKNNFTNGQQLPLPAYRPDFEENGNKINTGEYTENSSTALPTFAQHITNVPLAAKG
GVANAHPHPYAIASAVNIATNGSSEALVENHKVEEVTNTAEEQLMYDKNIINEAVHQSRL
AVGETIKEFVATRSDIEGAYKPLYELLTDYPFRLGKMLRPTLCISVARAVGGRGHDALTS
AAALELYHNAFLIHDDIEDGSESRRGKGTLHQMIGIPRAINVGDATNVLAVGLLLENLSS
IGVSKALNVLHEIEFMAQQSVEGQAMELDWVATNASHLTDQDYFKMCVKKTCWYSFITPC
RIGLIVGHPSASNKELVNHLAGITRFGMLLGIAFQIQDDLLNLQGQIENYGKEIGGDIYE
GKRTLMLNHVLSHRGKASEKILKILALPRDKKTPEDIAFISEQMQLCGSIEHGWEVARSL
TNKAARIFDNLDFLQSENPLRSEEKWGCPVHDRRFLKEIINYVIYRNV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaatttttctgttcatactgtacttctgcttttctgcttggttaatgtacgac
cataaacagaaaataggaattcaaatacaagaagagttacccaaaaaagttattaaaatt
accacggcaacaccaaagaaacaacagaaaaataaacccgtactcgcagtagaagtcaat
ctagccaacagtattaaaaacaactttacaaacggtcagcagttgcctctgcctgcttat
agaccggattttgaagagaatggtaataagataaacacaggggaatacacggaaaattcc
tcgacagcgctgcccacgtttgcccaacacattacaaacgtgccattagcagctaaaggg
ggagtggcgaacgcgcatccacatccctatgcgatcgcctcagccgttaacatcgctacc
aatggatcgagtgaagctctcgtagaaaaccataaagttgaggaagtcaccaacactgcc
gaagagcagttaatgtatgacaaaaacattatcaatgaagcagtacaccaatcccggtta
gcagtaggcgaaacaatcaaagaatttgttgccactagaagtgatattgaaggtgcctat
aaaccattatatgaattattaactgattaccccttccgtctcggcaaaatgctgcgacca
actctgtgtattagtgttgccagagcagtaggaggtaggggacatgatgccttgacatca
gcagcagctcttgaactttatcacaacgcttttctaattcacgacgatatcgaagacggt
tccgaatctcgacgggggaaaggaactttgcaccaaatgattggaattccccgcgccatt
aatgtaggtgatgctaccaacgtcttggcagtaggtttattgctagaaaatctgtcaagc
attggagtttccaaagctctcaatgttttacatgaaatcgagtttatggcgcagcaatct
gtcgaaggacaggcaatggaattagattgggtggctaccaatgcttcccacctaaccgac
caagattattttaaaatgtgcgtcaaaaaaacctgctggtattcgtttattactccctgc
cgaattggtctgatcgtcggacatccatcagcaagtaataaggagctagttaaccatttg
gcaggtataactcgatttggtatgctattaggaattgcttttcagatccaagacgatttg
ttgaatttacaaggtcaaatcgaaaattatgggaaagaaattggcggtgatatttacgaa
ggcaaacgcaccttaatgctgaatcatgttttgtcacatcgtggcaaagcatctgagaag
atattgaaaatccttgctttaccccgcgataaaaaaacaccagaggatattgcttttatt
agtgaacaaatgcaactttgcggtagcatcgaacacggctgggaagttgcgcgatcgctt
accaacaaagccgcaagaatttttgataacctagattttcttcagtcagaaaacccgcta
cgctcagaagaaaaatggggatgtcctgtccacgaccgtcgatttctcaaagaaataatt
aactacgtgatttacagaaatgtgtaa
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