Allocoleopsis franciscana: Mic7113_6711
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Entry
Mic7113_6711 CDS
T02374
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V), alpha subunit/helicase superfamily I member
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mic
Allocoleopsis franciscana
Pathway
mic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mic7113_6711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mic03400
]
Mic7113_6711
Enzymes [BR:
mic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mic7113_6711
DNA repair and recombination proteins [BR:
mic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mic7113_6711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
Helicase_RecD
UvrD-helicase
AAA_22
nSTAND3
NPHP3_N
DUF4314
Motif
Other DBs
NCBI-ProteinID:
AFZ22273
UniProt:
K9WQ19
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All DBs
Position
pMIC7113.05:complement(776..3091)
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AA seq
771 aa
AA seq
DB search
MLEFNQVNRPTSLVSLTAPEIEQYLASGLFRGIGKKTAALLVAHFGADTLNVLEHSPEEL
FQVPRLQKYRIAAITEAIRDSSTNPVRGAIAWLLGLSTPLGLTLKLCEHYGHQTETILKS
NPYRIIDEVEGIGFKTADALALAIGISPHSEQRYNHGILQVFKDALSEGHCFVPFPQLLM
RALSLLSGCNHTPDPKEVQAVIQSCLMNQTLVEGNEDGSIYLKRVYRAELNVALFVKAFK
AQQQQSTFELEYWLHKLDQVAYQEFNRLSTEQREALYRAWAHPLSILTGGPGRGKTHILK
YLVQWLCDNGVNLALAAPTGKAAARMKEATGYEAQTIHRLLQWQGHGQSFLYNQNNPLPI
DWLIVDEFSMVDLFLFHSLLKALKPTTRLLLVGDFNQLPSVGAGMVLRDLILSEFIPTTQ
LQTIYRQQHDSPIVYAAEEVLSGKVPMLHQFKEHKAWMDVADCAMLCRSNPSSVADAIVD
LALQMKADSVDLNQQLMVLAPQKKGPAGVKALNARLQPIFNPKKDGQPEVVTGEVVYRVG
DRVIQLVNRYDTTPAVMNGESGWVVLVDASSKRVMVEFEGGAIVDYFPGNFEQIMHAYCL
TCHKSQGSEFQYVIMPLVLSNRRMLTRQLLYTTMTRASRTFIAVGQPEALSMAVATDKPA
RRYTQLSQFLLAPEEDLTGAMRSLGAGSGVNQGKQGSFVTIASRLRERQLYATKGQMTSI
GSLALRLYEDQFGHRPSKQLEVMEGMRFKTYHYTVEAVDLIDRAIDAVLKS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgctggagttcaaccaagttaatcgccctacctcgcttgtttcactcactgccccagaa
atcgaacaatacctagctagtgggctgtttcgcgggattggaaaaaagactgccgcgcta
ctggttgctcactttggtgcagacactcttaacgtcttggaacactccccagaagaactg
tttcaagtccctcgactccagaagtaccgtatcgctgccatcacagaggcgattagggac
agttcaactaacccagtgcgaggtgcgatcgcttggttgttaggactctctactcccttg
gggctaaccctaaaactctgcgagcactacggacaccaaactgaaacgatacttaagagc
aacccttatcgcatcattgatgaagttgagggaattgggttcaaaactgccgatgcctta
gcgctagcgatcggcatttctcctcatagcgaacagcgctacaatcatgggattctccaa
gtttttaaagatgctttgagtgaaggacattgttttgtcccttttcctcaattactgatg
cgagcgctctcactgctctctggttgcaaccatacccccgaccctaaggaggtgcaagcg
gtcattcaatcctgcctgatgaaccaaaccctggttgaagggaacgaggatggcagcatc
tacctcaagagagtctaccgcgctgaactgaacgtcgctttattcgttaaagcgttcaaa
gctcaacaacagcagtctacctttgaactcgaatactggttgcacaagttggatcaagtt
gcttaccaggaattcaatcgcctttcaacagaacagcgagaggctctttatagggcttgg
gcgcaccccttgagtattctcacaggtggccccggacgaggtaaaacccatatccttaaa
tacttggtgcagtggctttgtgacaacggagtaaatttagccctcgccgcgccaacgggt
aaagccgccgcccgcatgaaagaggctactggatacgaagcgcaaacgattcatcgcctg
ttgcagtggcagggacacggtcagtccttcctctacaaccagaacaatcctttgccgatt
gactggttgattgtggatgaatttagcatggttgacttgttcctctttcactccctgctg
aaagcgttaaaaccaaccaccagactattactcgtcggcgattttaaccagcttcccagt
gtgggagccgggatggtactgcgggacttgatactatcggaatttatacccacgactcaa
ttgcagactatctatcggcagcagcacgatagcccgattgtctatgccgccgaagaggtg
ctttctgggaaagtgccaatgctgcatcagtttaaggagcataaagcttggatggatgtg
gccgactgtgccatgctgtgccgttctaatccttcatctgtcgcggatgccattgttgat
ttggcgctccagatgaaagcggattcggtcgatttgaaccaacagctcatggtcttagcg
ccgcaaaaaaaggggccggctggagtcaaagcccttaatgctcgcttgcagcccatcttt
aatccaaaaaaagatggacagccagaagtggtaaccggagaggtggtgtaccgagttggc
gatcgcgtgattcagctcgtgaatagatatgatacgacaccggctgtgatgaatggagag
agtggttgggtcgtcttggtggatgcttcatcaaaacgggtgatggtggaatttgaaggg
ggtgcgattgttgactactttcctggtaacttcgagcaaatcatgcacgcctactgtctg
acttgccataagtcccaaggtagtgaatttcaatatgtgattatgcccttagtgctatcc
aaccgcaggatgctgactcgtcagttactttacaccacgatgacacgggcatctaggacg
tttattgcggtgggacaacccgaagctctttctatggcggtggcaacagataaaccggct
cgccgttatacgcagttgagccagttcctgcttgcacccgaagaagatttgacgggtgca
atgaggagtctgggcgcaggcagtggggtgaaccaagggaaacaagggtcttttgttacc
attgccagccgattacgcgagcgacaactctatgcaacgaaagggcagatgacttctatc
ggtagcttggcgctgcggctctatgaggatcagtttggacatcgcccgtcgaaacaactg
gaagtgatggaaggaatgcgatttaaaacttaccactacacagttgaggcggtggactta
attgaccgggcgattgatgcggttttgaagtcctga
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