Microbacter sp. GSS18: P0L94_03050
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Entry
P0L94_03050 CDS
T08893
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mica
Microbacter sp. GSS18
Pathway
mica03420
Nucleotide excision repair
mica03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P0L94_03050
03430 Mismatch repair
P0L94_03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mica03400
]
P0L94_03050
Enzymes [BR:
mica01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P0L94_03050
DNA repair and recombination proteins [BR:
mica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P0L94_03050
MMR (mismatch excision repair)
Other MMR factors
P0L94_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Slp
Motif
Other DBs
NCBI-ProteinID:
WES66290
LinkDB
All DBs
Position
655061..658471
Genome browser
AA seq
1136 aa
AA seq
DB search
MGAWPGGGGLSASVIAAALGLPEPTPDQRAVIEAPATPALVIAGAGSGKTETMAGRVVWL
VANGHVRRDEVLGLTFTRKAAGELGERIAARLSRVDEYARRGLVPHVPALAASGALADVW
ERVGREPERRRAAALGEQLDRLAREHGAVVGGEAAPVGEDVLLRARVSTYNAFADAIVRE
HAARIGRDAEAALLSQSGSWLTARRVVIDSLDERLATREDRFGTVVDAVQRLSGEVLDNR
VDLDDLARFGADMERAVAPLVNPDLAGPGDVEKLHAAMGGLGVLADLVRDYDRAKHARGA
LDFADQVAGALEIVRSAPEVARELREQYRVVLLDEYQDTSVLQTELLSGVFRDTAVMAVG
DPHQSIYGWRGASADNLRAFDRSFAVDTPCARFALMISWRNDRAILDAANAVIASAVGDV
PPLEARPGAGVGAVTREFADTIEDEAAAVAEWFAQARAAHEATSDRAHSGAILFRAKRHM
STFADALAARGIPHRILGLGGLLSTPEVVDVVAALRVLSDPSQGSSLIRLLVGPRFGVGV
ADMAALHELARTLAQRDASFARLPDALVQRLRASVGVDEQVSIVDAVDVVRALPGDYALL
SRFTPEGRRRIKDAGTVFERLRASATLPIPDLIRQIELELLLDVELAANESRGPARLASA
QLRSFVDEIRGFLAADERGSIGSLLAWLDHAEETDELMPRPEPPEPGVVQLLTIHGAKGL
EWDAVAVVRMVKDELPKRPRSTMGWLGFGVLPYGFRGDVDALPRLDWDPADGGGRSALQK
AIREFKNANRDHQEAEERRLAYVAVTRARQDLLLTGSRWGGQVQARRPSPYLVEIVEALT
LDAIDEPEDDENPYEGRQGATLRWPLDPLGERGDRVRAAAAAVRAALAAPRPPASDELDR
LLRERAARAVPPPIEAPPRVAASRFKDFVEDFSGTVSSIARPVPERPYRQTRIGTLFHAW
VEQRSGLVGRGTSLDAGLWEVDDDQQTEASLADASQLGELTSTFLASEWAPLQPIEVETE
IDVTLAGADGLVNVICKLDAVYRRDDRGGRIEIVDWKTGRPPAGEAERDERMLQLALYRV
AYHKRHDVPLSQIDVALYYVADDLVIRSDRVYSEAELVQRWNAAREARSVSRSASE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgggagcttggccgggcggcgggggcctgtcggcatccgtcatcgccgcggccctcggg
ctccccgagccgacaccggatcagcgcgcggtcatcgaggcgcccgccacacccgccctc
gtgatcgcgggagccggcagcggcaagaccgagacgatggccgggcgggtcgtgtggctc
gtcgccaacggtcacgtccgccgtgacgaagtgctcgggctgacgttcacgcgcaaggcc
gcgggcgaactgggggagcgcatcgcggcccgcctgtcgagggtcgacgagtacgcgcgc
cgcggtctcgtcccgcacgtgcccgcgctggcggcgtcgggagcgctcgccgacgtgtgg
gagcgcgtcggccgcgaacccgagcggcggcgtgccgcggcgctcggcgagcagctcgac
cgcctcgcccgcgagcacggcgccgtcgtcggcggcgaggcggcgccggtgggtgaggac
gtcctgctgcgcgcgcgcgtgtcgacctacaacgcgttcgcggacgccatcgtgcgagag
cacgcggcgcggatcgggcgcgacgccgaggcggcgctgctgagccagtccggctcatgg
ctgacagcgcgtcgcgtcgtgatcgactcgctcgacgaacgcctcgccacgcgcgaggac
cggttcggcacggtcgtggacgccgtccagcggctgtccggcgaagtgctcgacaaccgc
gtcgacctcgacgacctggcccggttcggcgccgacatggagcgtgccgtggcgccgctc
gtcaacccggatctggccggtcccggcgacgtcgagaagctgcatgcggcgatgggcggc
ctcggtgtgctcgccgacctggtgcgcgactacgaccgcgccaagcacgcgcgcggcgcc
ctggacttcgccgatcaggtcgccggtgcgctcgagatcgtgcgcagcgcccccgaggtg
gctcgcgaactccgggagcagtaccgcgtcgtgctgctcgacgagtaccaggacacatcc
gtgctgcagaccgagctgctcagcggtgtcttccgcgacaccgcggtcatggcggtcggc
gacccgcaccagtccatctacggctggcgcggcgcgagcgccgacaatctgcgcgcgttc
gaccgctccttcgccgtcgacacgccgtgcgcgcgcttcgccctcatgatcagctggcgc
aacgaccgggcgatcctggatgccgccaacgcggtcatcgcctcggcggtgggcgacgtc
cccccgctcgaggcgcgacccggcgccggcgtcggcgcggtgacgcgcgagttcgcggac
accatcgaggacgaggccgccgccgtcgcggagtggttcgcgcaggcccgggccgcgcac
gaggccacgagcgaccgcgcgcactcgggagcgatcctgttccgcgccaagcggcacatg
tcgacgttcgccgatgcgctcgcggcgcgcgggatcccgcaccgcatcctcggactcggc
ggcctgctgtccacccccgaggtcgtcgacgtcgtcgcggcgctgcgcgtgctcagcgac
ccgtcgcaggggtcgagcctcatccgcctcctggtcggtccgcggttcggcgtcggcgtg
gcggacatggctgcgctgcacgagctggcgcggaccctcgcccagcgcgacgcgtccttc
gcgcgcctgcccgacgcgctcgtgcagcggctgcgcgcgtcggtcggtgtcgacgagcag
gtgtcgatcgtggacgcggtcgacgtcgtccgcgcgcttccgggcgactacgcgctcctg
tcgcgcttcacgccggagggacggcggcggatcaaggatgcggggacggtcttcgagcgc
ctgcgcgcgtcggcgacgctgccgatcccggatctcatccgccagatcgagctcgaactg
ctcctggacgtcgagctcgcggcgaacgagagccgtggccccgcgcgtctggcctcggcg
cagctgcgctcgttcgtcgacgagatccgcggcttcctcgccgcggacgagcgcggctcg
atcgggagcctcctggcgtggctcgaccacgccgaggagaccgacgagctcatgccgcgg
ccagagccgcccgagcccggcgtcgtccagctgctcacgatccacggtgccaaggggctc
gagtgggacgccgtggcggtcgtccggatggtgaaggacgagctgcccaagcggccgcgc
tcgaccatgggatggctcggcttcggggtgctgccctatggattccgcggggacgtcgat
gcgcttccgcgcctcgactgggatccggcggacggcggggggcgcagcgctctgcagaag
gcgatccgcgagttcaagaacgccaaccgcgaccatcaggaggccgaggagcggcgtctg
gcctatgtcgccgtgacgcgcgcccgccaggacctgctcctgaccggctcccgctggggc
ggacaggtgcaggcccgccgcccgagcccgtacctggtcgagatcgtcgaggcgctgaca
ctggacgcgatcgacgaacccgaggacgacgagaacccgtacgagggccgtcagggggcg
acgctgcggtggccgctcgaccccctcggggagcgcggggatcgggtccgggcggccgcc
gccgccgtgcgcgccgcgctcgcggcgccgcgtccaccggcatccgacgaactcgaccga
ctgcttcgcgagcgcgcggcccgcgccgtgccgccgcccatcgaggcgccgccgcgcgtg
gcggcatcgcgcttcaaggacttcgtcgaggacttctcgggcactgtctcgtccatcgcg
cgccccgttccggaacggccctaccgccagacccggatcggcacgctgttccacgcgtgg
gtggagcagaggtccgggctcgtcggacgggggacgtcgctcgacgcggggctgtgggag
gtcgacgacgaccagcagaccgaggcgtcgctcgccgacgcctcccagctcggcgagctc
acgtcgaccttcctggcatcggagtgggcgccgctgcagcccatcgaggtcgaaaccgag
atcgacgtcacgctcgcgggcgccgacggcctggtgaacgtgatctgcaagctcgacgcg
gtctaccgacgcgacgaccgcggggggcgcatcgagatcgtggactggaagaccggccgg
ccgccggccggcgaagccgagcgcgatgagcggatgcttcagctcgcgctctaccgcgtg
gcctaccacaagcggcacgacgtgcccctgtcgcagatcgacgtcgcgctctactacgtc
gcggacgacctggtgatccggtcggaccgggtctactcggaggcggagctcgtccagcgc
tggaacgcggcccgcgaggcgcgttcggtctcgcgctcggcctcggagtga
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