Microbacter sp. GSS18: P0L94_06125
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Entry
P0L94_06125 CDS
T08893
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mica
Microbacter sp. GSS18
Pathway
mica03030
DNA replication
mica03430
Mismatch repair
mica03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mica00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P0L94_06125 (dnaE)
03430 Mismatch repair
P0L94_06125 (dnaE)
03440 Homologous recombination
P0L94_06125 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mica03032
]
P0L94_06125 (dnaE)
03400 DNA repair and recombination proteins [BR:
mica03400
]
P0L94_06125 (dnaE)
Enzymes [BR:
mica01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P0L94_06125 (dnaE)
DNA replication proteins [BR:
mica03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P0L94_06125 (dnaE)
DNA repair and recombination proteins [BR:
mica03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P0L94_06125 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
WES65644
LinkDB
All DBs
Position
complement(1297040..1300555)
Genome browser
AA seq
1171 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKIGAMTQAAADYGMPAIAVTDHGNTFAAFEFYNAARSA
GVKPIIGLESYVTPGTHRSDKSRVSWGTPEQKSDDVSGAGAYTHMTMWSQSTEGMHNLFR
LSSLSSIEGYYFKPRMDRELLETYGKGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQD
IFGKENYFAEIMDHGLSIERRVMTDLLRLAKDLDIPLVATNDSHYTHQHEADAHAALLCV
QSGSTLDDPNRFKFDGDGYYIKTAQEMRQIFREHPEACDNTLLIAERCEVEFDTAANYMP
RFPVPDGETEDSWLIKEVEKGLHYRYPGGIPDKVRKQAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFD
DRRRSEVIDYVTGKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGEKLTKAMPPAV
MGKDMPLSGMYDKEHPRFKEASEFRALIDTDAEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSEPLLDVIPIMRREQDGQIVTQFDYPSCEALGLIKMDFLGLRNLTIISDALDNIRMNRG
EELDLEHLELDDRGAYELLTRGDTLGVFQLDGGPMRSLLRLMKPDNFEDVSAVIALYRPG
PMGANSHINYALRKNGQQDVTPIHPELAEPLKDILDISYGLIIYQEQVMAIAQKVAGFSL
GQADILRRAMGKKKKSELDKQYEGFAGGMKERGYGDGAIKALWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAVYLNECRRMGIKVLPPDVGESIRY
FAAVGDDIRFGLGAVRNVGANVVDGIVRSREKEPFTAFHDFLAKVPLHVANKRTVESLIK
AGAFDSMGSTRRALLEIHEDAVEAAVDIKRNEATGAIGFDFDSLYEADEVQPPQVPERPE
WTKKDKLAFEREMLGLYVSDHPLAGLEIPLAKHASTSIHDLLASEDIEDGAQVTIAGLVT
SVQHRVAKSSGNPYGMITVEDFDGEITVMFMGKTYTEFASMLQADSILVVRGRVSRRDDG
MNLHAQSAFSPDLGTLETSGPLSLTVPESRATERVITELAHVLTRHSGDTEVTLRLHRGA
SAKIFEVPLPVNVTADLYGELKGLLGPQCLG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtggcatccgactccttcgttcacctgcacgtgcacagcgagtactcgatgctcgacgga
gccgccaagatcggcgcgatgacccaggcggcggccgactacggcatgcctgcgatcgcc
gtcaccgaccacggcaacaccttcgcggcattcgagttctacaacgcggcccgctccgcc
ggcgtcaagcccatcatcgggctcgagtcgtacgtcacgcccggcacgcaccgcagcgac
aagtcgcgcgtctcgtggggcacgcccgagcagaagagcgacgacgtgtcgggcgcgggc
gcgtacacccacatgacgatgtggagccagagcaccgagggaatgcacaacctcttccgg
ctcagctcgctctcgagcatcgagggctactacttcaagccccgcatggaccgcgagctg
ctcgagacctacggcaaggggctcatcgccacgaccggctgcccgtcgggcgaggtgcag
acgcgactgcgcctgggccagtacgacgccgcgcgcgcggcggcggccgagttccaggac
atcttcggcaaggagaactacttcgccgagatcatggaccacggcctctcgatcgagcgc
cgcgtcatgaccgacctgctgcgcctggcgaaggacctcgacatcccgctcgtcgccacg
aacgactcgcactacacccaccagcacgaggccgacgcgcacgcggccctgctctgcgtc
cagtccgggtccactctcgacgacccgaaccgcttcaagttcgacggcgacggctactac
atcaagaccgcgcaggagatgcggcagatcttccgcgagcaccccgaggcgtgcgacaac
acgctgctgatcgccgagcgctgcgaggtcgagttcgacaccgccgcgaactacatgccg
cgcttcccggtgcccgacggcgagaccgaggacagctggctgatcaaagaggtcgagaag
gggctgcactaccggtacccgggcggcatccccgacaaggtccgcaagcaggccgagtac
gagaccgggatcatcctgcagatggggttccccggctacttcctcgtcgtcgccgacttc
atcaactgggccaaggacaacggcatccgcgtgggtcctggccgaggctcgggcgcggga
tcgatggtcgcgtacgcgatgcgcatcaccgacctcgacccgctcgagcacgggctgatc
ttcgagcggttcctcaaccccgatcgcgtgtcgatgcccgacttcgacgtcgacttcgac
gaccgccgccgcagcgaggtgatcgactacgtcaccggcaagtacggctccgagcgcgtg
gcgcagatcgtcacctacggcacgatcaagtccaagcaggcgctcaaggacgccggacgc
gtgctcggattcccgttcagcatgggcgagaagctcaccaaggcgatgccgccggcggtg
atgggcaaggacatgccgctgagcggcatgtacgacaaggagcacccccggttcaaggag
gccagcgagttccgcgcgctcatcgacaccgacgccgaggccaagaccgtcttcgaccgt
gcgctcgggctcgaggggctcaagcgccagtggggcgtgcatgcggccggcgtcatcatg
tccagcgagccgctgctggatgtcatcccgatcatgcgccgcgagcaggacggccagatc
gtcacccagttcgactacccgtcgtgcgaggcgctcggcctcatcaagatggacttcctg
gggctgcgcaacctcacgatcatctcggacgcgctcgacaacatccgcatgaaccggggg
gaggagctcgacctcgagcatctcgaactcgacgatcgcggcgcgtacgagctgctgacc
cgcggcgacacgctcggcgtcttccagctcgacggcggaccgatgcggtcgctgctgcgc
ctcatgaagcccgacaacttcgaggacgtctcggccgtcatcgcgctgtaccgccccgga
cccatgggcgcgaactcgcacatcaactacgcgctgcgcaagaacggccagcaggacgtc
acgccgatccatcccgagctcgcggagcccctcaaggacatcctcgacatcagctacggc
ctgatcatctatcaggagcaggtgatggcgatcgcgcagaaggtcgcgggcttctcgctc
ggtcaagccgacatcctccgccgcgcgatgggcaagaagaagaagtccgagctggacaag
cagtacgagggcttcgccggcggcatgaaggagcgcgggtacggcgacggcgcgatcaag
gcgctgtgggacatcctgctgccgttctcggactacgcgttcaacaaggcgcactcggcc
gcgtacggactggtgtcgtactggacggcgtacctcaaggcccactatcccgccgagtac
atggcggcgctgctcacgagcgtcggcgactcgaaggacaagatggcggtctacctcaac
gagtgccgccgcatgggcatcaaggtgctcccgcccgacgtgggggagtccatccgctac
ttcgcggccgtcggcgacgacatccgcttcgggctgggcgccgtgcgcaacgtcggcgcc
aacgtggtcgacgggatcgtccgctcgcgcgagaaggagcccttcaccgccttccacgac
ttcctggccaaggtgccgctgcacgtggcgaacaagcgcaccgtggagtccctcatcaag
gcgggggcgttcgactccatgggcagcacgcggcgcgccctgctcgagatccacgaggac
gccgtcgaagcggccgtcgacatcaagcggaacgaggccacgggcgcgatcggcttcgac
ttcgacagcctgtacgaagccgacgaggtccagccgccgcaggttcccgagcgtcccgag
tggacgaagaaggacaagctcgcgttcgagcgcgagatgctcgggctctacgtgtcggac
cacccgctcgcgggcttggagatcccactcgccaagcacgcgtcgacgagcatccatgat
ctgctcgcgtcggaggacatcgaggacggcgcccaggtgaccatcgcgggcctggtcacg
agcgtgcagcatcgcgtcgcgaagtccagcggcaacccgtacggcatgatcaccgtcgag
gacttcgacggcgagatcaccgtgatgttcatgggcaagacgtatacggagttcgcgtcg
atgctgcaggccgactcgatcctcgtcgtccgcggccgcgtgtcgcgccgcgacgacggc
atgaacctgcacgcgcagtcggcgttctcgcccgacctcggcacgctcgagacgtccggg
ccgctgtcgctgacggttcccgagagccgcgcgaccgagcgcgtcatcaccgaactggcc
cacgtgctcacccgtcacagcggcgacaccgaggtcacgctgcggctccaccgcggcgcg
tcggcgaagatcttcgaagtccccctgcccgtgaacgtcaccgccgatctgtacggcgag
ctgaaggggctgctggggccgcaatgcctcggctga
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