Micromonospora sp. B006: MicB006_0013
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Entry
MicB006_0013 CDS
T05583
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micb03032
]
MicB006_0013
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_0013
Enzymes [BR:
micb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MicB006_0013
DNA replication proteins [BR:
micb03032
]
Prokaryotic type
DNA Topoisomerases
MicB006_0013
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MicB006_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
TPD52
Motif
Other DBs
NCBI-ProteinID:
AXO32329
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Position
11465..15244
Genome browser
AA seq
1259 aa
AA seq
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MTDTPESTPNEPETPETLAAVVQHDRIEPVGLEVEMQRSYLDYAMSVIVGRALPDVRDGL
KPVHRKILYAMFDSGYRPDRGYVKCSRVVGDVMGQFHPHGDSAIYDALVRMAQPWSLRYP
LVDGNGNFGSPGNDPAAAMRYCVTADVRVRTVDGTVRIGDIVPDAAPSSETDVDLKVRDR
NGDLVRASRFFHSGEHPTLRLRTREGYELTGTHNHPVLCLVNVAGVPTLLWKLLAEIAPG
DRVVLQRTVPDEIGYPMLEHVEAAVLAGAFVSEGWVSENRAGFNNVDREFFVRVLTAYDL
AVGGPRYVAERVVASGSTLHELDVQDLTALRASVLGEMVGARSADKFVPEFVWRGPAAVK
RAFLQALFEGDGSSSLLPRHTIQVSYSTRSERLAREVQQLLLEFGVVSRQCRYDNGEIKV
VVTNRRDARIFAAHVGFLGRKQAKLESELAQVPASSTALSGDHVPFVGDFVREHGASRWT
ERDWLRRHNVDRIERWERDRDEIAARITEPGILDVVEPLVDGRFYYAQVTEITDAGVRPV
YSIRVDTEDHSFVSDGFVSHNTECKLDPLAMEMLRDIDEDTVDLQDNYDGRAKEPTILPS
RIPNLLVNGSEGIAVGMATKIPPHNLREIGAAVQWCLENPETDEATTLEALLEIVKGPDF
PTHGLIVGQAGIQDAYRTGRGSIRMRAVVEVEEDKRGRPALVVSELPYQVNPDNLAERIA
ELIKEGKLAGIADIRDESSGRTGMRIVLVLKRDAVAKVVLNNLYKHTQLQETFGANMLAL
VDGVPRTLNLAQFLRYYVEHQIEVIRRRTAFRLRKAEERAHILRGLSKALDALDEVIALI
RRSPTVEDARQGLIRLLEIDEVQATAILDMQLRRLAALERQRILDDLAKLELEIADLKDI
LAKPERQRRIVSEELGEIVAKWGDDRRTKIVPFDGEVSMEDLIAREDVVVTITRTGYAKR
TKVDLYRSQRRGGKGVSGATLRQDDIVSHFFVCSTHDWILFFTNKGRVYRAKAYELPEAS
RVAKGQHVANLLAFQPDEQIAQIIEIPNYQVAPYLVLATKNGLVKKTRLEEFDSNRSGGI
IAINLRDEDELVGAVLAAPEDDLLLVSKNAQAIRFNATDEALRPMGRATSGVIGMRFSGE
DELLAVEVVREGLDVLVATNGGYAKRTPIEEYPVQGRGGKGVLTAKITERRGGLVGAVVI
DPEDELFAITSNGGVIRTPVKPVRRTRDRNTMGVKLMDLPDGVTIVAIARNADEPDEQD
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatactcccgagtccaccccgaacgagccggagaccccggagacactggccgcg
gtcgtccagcacgaccggatcgagccggtcggcctcgaggtcgagatgcagcgctcgtac
ctcgactacgcgatgagcgtcatcgtcgggcgggccctgccggacgtccgggacgggctc
aagccggtccaccgcaagatcctctacgccatgttcgactccggctaccggccggaccgc
gggtacgtgaagtgctcccgcgtcgtcggtgacgtgatgggccagttccacccgcacggc
gactccgccatctacgacgcgctggtccggatggcgcagccgtggtcgctgcgctacccg
ctggtcgacggcaacggcaacttcggctcgcccggcaacgatccggctgccgccatgagg
tactgcgtcacggcagatgtccgggttcgtaccgttgacggcaccgtccggatcggcgac
atcgtgccggacgccgcgccgagcagcgagaccgacgtcgacctcaaggtccgcgaccgc
aacggcgacctggtccgcgcctccaggttcttccactccggtgagcacccgacgctgcgg
ttgcgcacccgcgaggggtacgaactgacgggcacccacaaccacccggtgctctgcctg
gtgaacgtggccggcgtgccgactctgctctggaagctgctcgccgagatcgccccgggc
gaccgggtggtcctccagcgcacggtgccggacgagatcggctacccgatgctggagcac
gtcgaggcggccgtgctcgccggggcgttcgtctccgagggctgggtgtcggagaaccgg
gcgggcttcaacaacgtggaccgggagttcttcgtccgggtcctcaccgcctacgacctc
gcggtcggcggccctcggtacgtcgccgagcgggtcgtcgcctccggcagcacgctgcac
gagctcgacgtacaggatctcaccgcgctccgggcgagcgtgctcggcgaaatggtgggg
gcgcggagcgccgacaagttcgtgccggagttcgtctggcgcggaccggccgcggtcaag
cgggccttcctccaggcgctgttcgagggcgacggttcgtcgtcgctgctgccccgccac
acgatccaggtctcctactcgacccgcagtgagcggctggcccgcgaggtgcagcagctg
ctgctggagttcggcgtggtcagccggcagtgccggtacgacaacggcgagatcaaggtt
gtcgtcaccaaccggcgggacgcgcggatcttcgccgcccacgttggcttcctcggccgc
aagcaggccaagctggaatccgagctggcccaggtcccggcgagcagcaccgcgctctcc
ggcgatcacgtgcccttcgtcggcgacttcgtccgcgagcacggcgcgagccgctggacc
gagcgcgactggctgcgccggcacaacgtggaccggatcgagcgctgggagcgggaccgc
gacgagatcgcggcccggatcaccgagccgggcatcctcgacgtggtcgagccgctggtc
gacgggcgcttctactacgcccaggtgaccgagatcaccgacgccggtgtgcggccggtc
tacagcatccgggtggacaccgaggaccactcgttcgtctccgacggcttcgtcagccac
aacacggagtgcaagctcgacccgctggcgatggagatgctgcgggacatcgacgaggac
accgtcgacctgcaggacaactacgacggccgggccaaggagcccaccatcctgccgtcg
cggatcccgaacctgctcgtcaacggttccgagggcatcgcggtcggcatggccaccaag
atcccgccgcacaacctgcgggagatcggcgcggcggtccagtggtgcctggagaacccg
gagaccgacgaggcgaccacgctggaagccctgctggagatcgtcaagggtccggacttc
ccgacccacggcctgatcgtcggccaggcgggcatccaggacgcgtaccggaccgggcgt
ggctcgatccggatgcgcgccgtggtcgaggtcgaggaggacaagcgcggccggccggcg
ctcgtggtcagcgagctgccgtaccaggtcaacccggacaacctcgccgagcgcatcgcc
gagctgatcaaggagggcaagctcgccggcatcgccgacatccgcgacgagtcctccggg
cgtaccggcatgcggatcgtgctcgtcctcaagcgcgacgcggtcgccaaggtggtgctg
aacaacctctacaagcacacccagctccaggagacgttcggcgccaacatgctggcgctc
gtcgacggcgtgccgcgcacgctcaacctggcccagttcctccgctactacgtcgagcac
cagatcgaggtgatccggcggcggaccgcgttccggctgcgcaaggccgaggagcgggcg
cacatcctgcgcggtctgtccaaggcgctggacgcgctggacgaggtcatcgccctgatc
cggcgttcgcccactgtggaggacgcccggcagggtctgatccggctgctggagatcgac
gaggtccaggcgacggcgatcctggacatgcagctgcgccggctggccgccctggagcgg
cagcgcatcctggacgacctggcgaagctcgaactggagatcgccgacctcaaggacatc
ctggccaagccggagcggcagcggcggatcgtctcggaggagctgggcgagatcgtcgcg
aagtggggcgacgaccggcgtacgaagatcgtcccgttcgacggcgaggtctcgatggag
gacctcatcgcccgcgaggacgtggtcgtgacgatcacccgcaccgggtacgcgaagcgg
accaaggtcgacctctaccggtcgcagcggcgcggcggcaagggcgtcagcggggcgacg
ctccgccaggacgacattgtcagccacttcttcgtatgctctacccacgactggatcctg
ttcttcacgaacaagggccgggtctaccgggcgaaggcgtacgagcttcccgaggccagt
agggtggccaagggccagcacgtggccaacctgctcgcgttccagcccgacgagcagatc
gcgcagatcattgaaatcccgaactaccaggtggcgccctacctggtactggccacgaag
aacggcctggtgaagaagacgcggcttgaggagttcgactccaaccgttccggcggcatc
atcgcgatcaacctgcgcgatgaggacgaactggtcggtgcggtccttgccgctccggag
gacgacctgttgctggtgtcgaagaacgcccaggccatccgcttcaacgccaccgacgag
gcgctgcgtccgatgggccgcgccacctccggcgtgatcggcatgcgcttcagcggcgag
gacgagttgctcgccgtcgaggtggtccgggagggtctggacgttctggtcgcgacgaac
gggggttacgcgaaacgtaccccgatcgaggaatacccggtccagggccggggaggtaag
ggcgtgctgaccgcgaagatcaccgagcgacgcggtggcctggtcggcgcggtcgtgatc
gatccggaggacgagctgttcgccatcacgagcaacggcggcgtcatccggactccggtg
aagcctgtacgccgtacgcgtgaccggaacacaatgggggtcaagctgatggacctcccg
gacggcgtgactatcgtggcgattgctcgcaatgccgacgagcctgacgaacaggactag
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