Micromonospora sp. B006: MicB006_0862
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Entry
MicB006_0862 CDS
T05583
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
micb
Micromonospora sp. B006
Pathway
micb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MicB006_0862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
micb02000
]
MicB006_0862
Transporters [BR:
micb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MicB006_0862
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_29
AAA_23
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
AXO33166
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Position
complement(853008..854741)
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AA seq
577 aa
AA seq
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MLIRLLRTHLRPYRRWLVAVVAFQFVGTIASLYLPSLNADIIDRGVAVGDTDQILRTGGW
MLLVSLLQIACSIAAVYFGAKTAMGFGRDVRGSIFRRVNSFSAREVARFGAPSLITRNTN
DVQQVQMLVLLSCTMLVAAPIMSVGGVVMALREDVGLSWLMLVCVPVLAVALGLIIRRMV
PGFRLMQTRIDTVNRVLREQITGIRVVRAFVREPYETDRFGAANTDLTATALRIGRLQAL
IFPIVMLVLNVSSVAVLWFGAARVDSGQIQVGALTAFLQYLMQILMAVMMATFMLMMVPR
AAVCAERIEEVLDTDSSVVPASDPVTEVTGHGELELRGAGFQYPGASAPVLHDISFRAEP
GRTTAIIGSTGAGKTTLLTLIPRLVDPTAGAVLVDGVDVRELAPDELWRRIGLVPQRPYL
FSGTVASNLRYGNPDATDADLWAALEIAQARDFVADMAGGLDAPIAQGGTNVSGGQRQRL
AIARALVRKPEIYLFDDSFSALDLGTDARLRAALKPVTADAAVVIVAQRVSTIVDADQII
VLEDGGVVGMGRHEELLESCPTYAEIVASQQTAEVAA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgttgatccgcctgctccgcacacacctgcgcccgtaccgacgatggctggtcgccgtg
gtggcgttccagttcgtcggcaccatcgcctcgctctacctgcccagcctgaacgccgac
atcatcgaccgcggcgtcgccgtcggcgacaccgaccagatcctgcgtacgggcggctgg
atgctgctggtcagcctgctccagatcgcctgctcgatcgccgccgtctacttcggggcg
aagaccgcgatgggcttcggccgcgacgtgcgcggttccatcttccggcgggtgaacagc
ttctccgcccgcgaggtggcccggttcggcgcgccgtccctgatcacccgcaacaccaac
gacgtccagcaggtgcagatgctggtgctgctgagctgcaccatgctggtcgccgcgccg
atcatgagcgtcggcggagtggtgatggcgctccgtgaggacgtcgggctctcctggctg
atgctggtctgcgtaccggtgctcgcagtcgcgctgggcctgatcatccgccggatggtg
ccgggcttccggctcatgcagacccggatcgacacggtcaaccgggtgctgcgcgagcag
atcaccggcatccgggtggtccgggccttcgtccgcgagccgtacgagaccgaccgcttc
ggggcggcgaacaccgacctgaccgccaccgccctgcggatcgggcggctccaggcgctg
atcttcccgatcgtgatgctggtcctgaacgtctccagcgtcgcggtgctctggttcggc
gcggcgcgtgtcgactccggccagatccaggtcggcgcgctgaccgcgttcctgcagtac
ctgatgcagatcctgatggcggtcatgatggccaccttcatgctgatgatggtcccccgg
gccgcggtctgcgccgagcgcatcgaggaggtgctggacaccgactcgtcggtggtgccg
gcgtccgacccggtcaccgaggtcaccggccacggcgagttggagctgcgcggcgccgga
ttccagtacccgggcgcgagcgcgccggtcctgcacgacatctcgttccgcgccgaaccg
ggccggaccaccgcgatcatcggctccaccggcgccggcaagaccacgctgctgacgctg
atcccccgcctggtcgaccccaccgccggcgccgtcctggtcgacggcgtggacgtccgg
gaactcgccccggatgagctgtggcggcggatcgggctggtgccccagcggccgtacctg
ttcagtggcaccgtcgccagcaacctgcgctacggcaatccggacgccaccgacgccgac
ctgtgggccgccctggagatcgcccaggcgcgcgacttcgtcgccgacatggcgggcggg
ctggacgcgccgatcgcgcagggcggcacgaacgtctccggtggccagcggcaacggctg
gcgatcgcccgcgcgctcgtgcgcaaaccggagatctatctcttcgacgactccttctcc
gcgctcgacctcggcacggacgcccggctgcgggccgccctcaagccggtcaccgcggac
gcggcggtggtgatcgtggcccagcgggtctccacgatcgtcgacgccgaccagatcatc
gtgctcgaggacgggggtgtcgtcgggatgggacgacacgaggaactactggagagctgt
cccacgtacgccgagatcgtggcgtcgcagcagacggcggaggtggccgcatga
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