Micromonospora sp. B006: MicB006_1512
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Entry
MicB006_1512 CDS
T05583
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
micb
Micromonospora sp. B006
Pathway
micb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MicB006_1512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micb03019
]
MicB006_1512
03016 Transfer RNA biogenesis [BR:
micb03016
]
MicB006_1512
Enzymes [BR:
micb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MicB006_1512
Messenger RNA biogenesis [BR:
micb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MicB006_1512
Transfer RNA biogenesis [BR:
micb03016
]
Prokaryotic type
tRNA degradation factors
MicB006_1512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
KH_PNO1_2nd
OB_cyt-4
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
AXO33807
LinkDB
All DBs
Position
1545537..1547939
Genome browser
AA seq
800 aa
AA seq
DB search
MTETNLGTESRTAVIDNGAFGTREITFSTGRLARQAAGSVVAQLGETVVLSATTAGKQPR
ESFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVKGLRNEV
QVVETVLALDPQHPYDVVAINAASMSTKLSGLPFSGPIGATRVAHVDGQWVAFPTLEELE
RATFDMVVAGRTLADGEVAIMMVEAEATPNAVTLISGGATAPTEEIVASGLEAAKPAIRE
LCRAQSELAEVAAKPVAEFPVFLDYSDDAYDAVADVARADVAEALKIAGKADREEALDRI
KAKVAEQLTGRFEGREKELSAAFRSLTKSEVRNRVLREQVRIDGRGPRDIRPLSAEVGVL
PRVHGSALFERGETQILGVTTLNMLRMEQMVDTLSPENRKRYMHNYNFPPYSTGETGRVG
SPKRREIGHGALAERALLPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLGLLSAG
VPLKAPVAGIAMGLISDEVDGKTQYVTLTDILGAEDAFGDMDFKVAGTRDFVTALQLDTK
LDGIPSDVLAAALQQAHEARQTILDVMQRAIEAPAEMSDYAPRVTTVKIPVDKIGMVIGP
KGQTINAIQDETGAEISIEDDGTIYVGATNGPAAQAAVDRINGIANPTLPKVGERFLGTV
VKTAAFGAFISLLPGRDGLLHISKVGDGKRVEKVEDFLNVGDKVEVEIADIDARGKIYLD
KIRPEGAEAPAAGEAAGGDRPSGGRDRGGDRGPRDRGDRGGERGERRSEGGERRSEGGER
RSEGGEGGGDSRPRRRTRHS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaccaacctcggcaccgaatcccgcaccgcggtgatcgacaacggggccttc
ggcacccgcgagatcaccttctccaccggccgcctggcccgccaggccgccggctccgtc
gtcgcccagctcggcgagacggtcgtcctctccgcgaccacggccggcaagcagccgcgc
gagtcgttcgacttcttcccgctgacggtggacgtcgaggagcggatgtacgccgcgggc
cggatccccggctcgttcttccgccgcgagggccggcccagcgaggacgccatcctcacc
tgccggctgatcgaccggccgctgcgcccgtcgttcgtcaagggcctgcgcaacgaggtc
caggtcgtcgagaccgtcctggcgctcgacccgcagcacccgtacgacgtggtggcgatc
aacgccgcgtcgatgtcgaccaagctctccggcctgccgttctccggcccgatcggcgcg
acccgggtcgcgcacgtcgacggccagtgggtcgccttcccgacgttggaggagctggag
cgggccaccttcgacatggtcgtggccggccgcacccttgccgacggcgaggtcgcgatc
atgatggtcgaggccgaggccaccccgaacgcggtgaccctgatctcgggcggcgccacc
gcgccgaccgaggagatcgtggccagcggcctggaggccgccaagccggccatccgtgag
ctgtgccgggcgcagagcgagctggccgaggtggccgccaagccggtcgccgagttcccg
gtcttcctggactactccgacgacgcgtacgacgcggtggccgacgtggcccgcgccgac
gtcgccgaggcgctgaagatcgccggcaaggccgaccgcgaggaggccctggaccgcatc
aaggccaaggtcgccgagcagctgaccggtcggttcgagggtcgcgagaaggagctgtcc
gccgcgttccgttcgctgaccaagtccgaggtccgcaaccgggtgctgcgcgagcaggtc
cgcatcgacggccgcggcccgcgtgacatccgtccgctgtccgccgaggtcggcgtgctg
ccgcgggtgcacggctcggcgctgttcgagcgcggcgagacccagattctgggcgtcacc
acgctgaacatgctgcgcatggagcagatggtggacacgctgtccccggagaaccgcaag
cgctacatgcacaactacaacttcccgccgtactcgaccggtgagaccggccgggtcggc
tcgccgaagcggcgcgagatcggccacggcgcgctcgccgagcgggcgctcctcccggtg
ctgccctcgcgcgaggagttcccctacgccatccggcaggtctccgaggcgctcagctcc
aacggctccacctcgatgggttcggtctgcgcctcgacgctgggcctgctctcggccggt
gtgccgctgaaggcgccggtcgccggcatcgccatgggcctcatctccgacgaggtcgac
ggcaagacccagtacgtgacgctgaccgacatcctcggcgccgaggacgcgttcggcgac
atggacttcaaggtcgccggcacccgggacttcgtcaccgcgctccagctcgacaccaag
ctggacggcatcccgtcggacgtgctggccgccgcgctccagcaggcgcacgaggcccgg
cagaccatcctcgacgtgatgcagcgggccatcgaggcgccggccgagatgtcggactac
gcgccgcgggtcaccaccgtgaagatcccggtcgacaagatcggcatggtgatcggcccg
aagggccagaccatcaacgcgatccaggacgagaccggcgccgagatctccatcgaggac
gacggcacgatctacgtcggcgcgaccaacgggccggcggcccaggccgctgtggaccgg
atcaacgggatcgccaacccgacgctgcccaaggtcggcgagcggttcctcggcaccgtg
gtgaagaccgccgcgttcggcgccttcatctcgctgctgcccggccgcgacggcctgctg
cacatctccaaggtgggcgacggcaagcgggtcgagaaggtcgaggacttcctcaacgtc
ggcgacaaggtcgaggtggagatcgcggacatcgacgcccgcggcaagatctacctggac
aagatccgtccggagggcgccgaggcgccggccgccggtgaggccgccggtggcgaccgt
ccgtcgggcggccgggaccgcggcggcgaccgtggcccgcgtgaccgcggcgaccggggc
ggggagcgtggcgagcgccgctccgagggtggcgagcgccgttccgagggtggcgagcgc
cgctccgagggtggcgagggcggcggcgactcccgtccgcgtcgccggacccggcacagc
tga
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