Micromonospora sp. B006: MicB006_1566
Help
Entry
MicB006_1566 CDS
T05583
Name
(GenBank) hydrolase (HAD superfamily)
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
micb
Micromonospora sp. B006
Pathway
micb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MicB006_1566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micb03019
]
MicB006_1566
Messenger RNA biogenesis [BR:
micb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MicB006_1566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
DUF6479
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
AXO33861
LinkDB
All DBs
Position
1607551..1609317
Genome browser
AA seq
588 aa
AA seq
DB search
MSAFDIVLLVVVLLLVVVVVGAVLFGVRTLKRLSLAPAPEDPAFIAEKDRQEQSLAALRT
AASEANSTIDVAKSAAAAARAEAAAAKAEAKAARAEARRVLDDARAEADTVLERAHKQAE
ADAEQLRATARRSGEREVAVLAATTREQAAEVERRAARMDERERLHTEEVERLAERERQL
TAATAALAAREAALAERERTLTEVEEQRRRELERVAGLTADAARVELVESIEGQAKREAA
LLVREIEADARGSAEQRARNIVVDAIQRVASEQTAESVVSVLHLPGDEMKGRIIGREGRN
IRAFESVTGVNLIIDDTPEAVLLSCFDPVRREVGRVTLEKLVLDGRIHPHRIEEVYDLAR
QEVEELCLRAAEDALVEVGITEIHPELVTLLGRLRYRTSYGQNVLKHLVETAHIAGVMAA
ELRLDVPTIKRCAFLHDIGKALTHEVEGSHAIIGADVARKYGESEDVVHAIEAHHNEVPP
QTIEAVLTQASDACSGGRPGARRESLEAYVKRLERIEEIAAGKLGVEKVFAMQAGREIRV
MVKPDDVDDIGAAVLARDVAKQIEEELTYPGQIRVTVVRESRVTEIAR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccttcgacatcgttctcctcgtggtggtgctgctgctggtcgtggtggtggtc
ggcgccgtgctgttcggcgtgcgtaccctcaagcggctcagcctggcgcccgcgccggag
gatccggccttcatcgcggagaaggaccggcaggagcagtccctcgcggcgctgcgtacc
gccgccagcgaggcgaacagcaccatcgacgtggcgaagtccgcggccgcggcggcgcgt
gccgaggcggctgccgccaaggccgaggcgaaggcggcccgggccgaggcgcggcgggtg
ctcgacgacgcccgcgccgaggcggacaccgtgctggagcgcgcgcacaagcaggccgag
gcggacgccgagcagctgcgcgccaccgcgcggcgcagcggcgagcgggaggtggcggtg
ctggccgccaccacccgggagcaggcggccgaggtggaacgccgggccgcccggatggac
gagcgggaacggctgcacaccgaggaggtggagcggctggccgagcgggagcggcagctc
accgccgccaccgcggcgctcgccgcccgggaggccgccctggccgagcgggagcggacg
ctgaccgaggtggaggagcagcgtcgccgcgagctggagcgcgtcgccgggctgaccgcc
gacgcggcccgcgtggagctggtcgagtcgatcgaggggcaggccaagcgggaggccgcg
ctgctggtccgggagatcgaggcggatgcccggggcagcgccgagcagcgcgcccgcaac
atcgtggtggacgccatccagcgggtcgccagcgagcagaccgcggagagcgtggtcagc
gtgctgcacctgcccggtgacgagatgaaggggcgcatcatcggccgggaggggcgcaac
atccgcgccttcgagtcggtcaccggcgtcaacctgatcatcgacgacacccccgaggcg
gtgctgctgtcctgcttcgacccggtacgccgggaggtcggccgggtcacgctggagaag
ctggtgctcgacggccggatccacccgcaccggatcgaggaggtctacgacctggcccgg
caggaggtggaggagctgtgcctccgggccgccgaggacgccctggtcgaggtcggcatc
accgagatccacccggagctggtgacgctgctgggccggttgcgctaccgcacctcgtac
gggcagaacgtgctcaagcacctggtggagaccgcgcacatcgccggcgtcatggccgcg
gagctgcggctggacgtgccgacgatcaagcggtgcgcgttcctgcacgacatcggcaag
gcgctcacccacgaggtggagggcagccacgcgatcatcggcgcggacgtggcccgcaag
tacggcgagagcgaggacgtggtgcacgccatcgaggcgcaccacaacgaggtgccgccg
cagaccatcgaggcggtgctgacccaggcgtcggacgcctgctcgggcgggcggccgggc
gcgcggcgggagagccttgaggcgtacgtgaagcggctggagcggatcgaggagatcgcg
gccggcaagctgggcgtggagaaggtcttcgccatgcaggcgggccgggagatccgggtg
atggtcaagccggacgacgtggacgacatcggcgcggcggtgctggcccgggacgtggcc
aagcagatcgaggaggagctgacctacccgggtcagatccgggtgactgtggtgcgcgag
tcccgggtcaccgagatcgcccgctag
DBGET
integrated database retrieval system