KEGG   Micromonospora sp. B006: MicB006_1566
Entry
MicB006_1566      CDS       T05583                                 
Name
(GenBank) hydrolase (HAD superfamily)
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
micb  Micromonospora sp. B006
Pathway
micb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:micb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MicB006_1566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:micb03019]
    MicB006_1566
Messenger RNA biogenesis [BR:micb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MicB006_1566
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B DUF6479 FUT8_N_cat
Other DBs
NCBI-ProteinID: AXO33861
LinkDB
Position
1607551..1609317
AA seq 588 aa
MSAFDIVLLVVVLLLVVVVVGAVLFGVRTLKRLSLAPAPEDPAFIAEKDRQEQSLAALRT
AASEANSTIDVAKSAAAAARAEAAAAKAEAKAARAEARRVLDDARAEADTVLERAHKQAE
ADAEQLRATARRSGEREVAVLAATTREQAAEVERRAARMDERERLHTEEVERLAERERQL
TAATAALAAREAALAERERTLTEVEEQRRRELERVAGLTADAARVELVESIEGQAKREAA
LLVREIEADARGSAEQRARNIVVDAIQRVASEQTAESVVSVLHLPGDEMKGRIIGREGRN
IRAFESVTGVNLIIDDTPEAVLLSCFDPVRREVGRVTLEKLVLDGRIHPHRIEEVYDLAR
QEVEELCLRAAEDALVEVGITEIHPELVTLLGRLRYRTSYGQNVLKHLVETAHIAGVMAA
ELRLDVPTIKRCAFLHDIGKALTHEVEGSHAIIGADVARKYGESEDVVHAIEAHHNEVPP
QTIEAVLTQASDACSGGRPGARRESLEAYVKRLERIEEIAAGKLGVEKVFAMQAGREIRV
MVKPDDVDDIGAAVLARDVAKQIEEELTYPGQIRVTVVRESRVTEIAR
NT seq 1767 nt   +upstreamnt  +downstreamnt
atgagcgccttcgacatcgttctcctcgtggtggtgctgctgctggtcgtggtggtggtc
ggcgccgtgctgttcggcgtgcgtaccctcaagcggctcagcctggcgcccgcgccggag
gatccggccttcatcgcggagaaggaccggcaggagcagtccctcgcggcgctgcgtacc
gccgccagcgaggcgaacagcaccatcgacgtggcgaagtccgcggccgcggcggcgcgt
gccgaggcggctgccgccaaggccgaggcgaaggcggcccgggccgaggcgcggcgggtg
ctcgacgacgcccgcgccgaggcggacaccgtgctggagcgcgcgcacaagcaggccgag
gcggacgccgagcagctgcgcgccaccgcgcggcgcagcggcgagcgggaggtggcggtg
ctggccgccaccacccgggagcaggcggccgaggtggaacgccgggccgcccggatggac
gagcgggaacggctgcacaccgaggaggtggagcggctggccgagcgggagcggcagctc
accgccgccaccgcggcgctcgccgcccgggaggccgccctggccgagcgggagcggacg
ctgaccgaggtggaggagcagcgtcgccgcgagctggagcgcgtcgccgggctgaccgcc
gacgcggcccgcgtggagctggtcgagtcgatcgaggggcaggccaagcgggaggccgcg
ctgctggtccgggagatcgaggcggatgcccggggcagcgccgagcagcgcgcccgcaac
atcgtggtggacgccatccagcgggtcgccagcgagcagaccgcggagagcgtggtcagc
gtgctgcacctgcccggtgacgagatgaaggggcgcatcatcggccgggaggggcgcaac
atccgcgccttcgagtcggtcaccggcgtcaacctgatcatcgacgacacccccgaggcg
gtgctgctgtcctgcttcgacccggtacgccgggaggtcggccgggtcacgctggagaag
ctggtgctcgacggccggatccacccgcaccggatcgaggaggtctacgacctggcccgg
caggaggtggaggagctgtgcctccgggccgccgaggacgccctggtcgaggtcggcatc
accgagatccacccggagctggtgacgctgctgggccggttgcgctaccgcacctcgtac
gggcagaacgtgctcaagcacctggtggagaccgcgcacatcgccggcgtcatggccgcg
gagctgcggctggacgtgccgacgatcaagcggtgcgcgttcctgcacgacatcggcaag
gcgctcacccacgaggtggagggcagccacgcgatcatcggcgcggacgtggcccgcaag
tacggcgagagcgaggacgtggtgcacgccatcgaggcgcaccacaacgaggtgccgccg
cagaccatcgaggcggtgctgacccaggcgtcggacgcctgctcgggcgggcggccgggc
gcgcggcgggagagccttgaggcgtacgtgaagcggctggagcggatcgaggagatcgcg
gccggcaagctgggcgtggagaaggtcttcgccatgcaggcgggccgggagatccgggtg
atggtcaagccggacgacgtggacgacatcggcgcggcggtgctggcccgggacgtggcc
aagcagatcgaggaggagctgacctacccgggtcagatccgggtgactgtggtgcgcgag
tcccgggtcaccgagatcgcccgctag

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