Micromonospora sp. B006: MicB006_1600
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Entry
MicB006_1600 CDS
T05583
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micb03021
]
MicB006_1600
Transcription machinery [BR:
micb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MicB006_1600
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AXO33895
LinkDB
All DBs
Position
complement(1644791..1645777)
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AA seq
328 aa
AA seq
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MTQQMIEHQDMDVTLTDLDATDERGVSTDLVRAYLNGIGRTKLLTAAQEVELSKRIEAGL
FAEEKLSTCTPVSAELRADLALIAAEGRAAKDHLLEANLRLVVSIAKRYTGRGMAFLDLI
QEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEQVNRMVR
VRRELSVSLGREPTVSEVAKALEIPEFQVIELISYDREPVSLDQAVGEDGESALGDFVAA
VDPRTEPGDAATNGELRNEVRIVLATLSQREQAVIRLRFGLDDGRQRTLDEVGREFGLSR
ERIRQIEKVTLLKLRDPERANRLEAYAC
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcagatgatcgagcaccaggacatggacgtcaccctcacggacctcgacgcc
accgacgagcgcggcgtctccaccgacctggtccgggcgtacctgaacggcatcggccgc
accaagctgctcaccgcggcgcaggaggtcgagctgagcaagcggatcgaggccggcctc
ttcgccgaggagaagctgtccacctgcacccccgtctccgccgagctgcgcgcggacctg
gcgctgatcgcggccgagggccgcgccgccaaggaccacctgctggaggcgaacctgcgg
ctggtggtgagcatcgccaagcgctacaccggacgcggcatggccttcctcgacctcatc
caggaaggcaacctcggcctcatccgcgccgtcgagaagttcgactacaccaagggctac
aagttctccacctacgccacctggtggatccgccaggccatcacccgcgccatggccgac
caggcccgcaccatccgcatcccggtgcacatggtcgagcaggtcaaccggatggtccgg
gtgcgccgcgagctgtcggtgtcgctgggtcgcgagcccacagtgagcgaggtggccaag
gcgctggagatccccgagttccaggtgatcgagctgatctcctacgaccgggagccggtc
agcctggaccaggccgtcggcgaggacggcgagagcgcgctcggcgacttcgtcgccgcc
gtcgacccgcgtaccgagcccggtgacgccgccaccaacggcgagctgcgcaacgaggtc
cggatcgtgctggccacgctgtcccagcgggagcaggcggtgatccggctgcgcttcggc
ctggacgacggccggcagcgcacgctggacgaggtgggccgcgagttcgggctgtcccgg
gagcggatccggcagatcgagaaggtgacgctgctgaagctgcgcgacccggagcgggcg
aaccggctggaggcgtacgcctgctga
DBGET
integrated database retrieval system
