Micromonospora sp. B006: MicB006_1686
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Entry
MicB006_1686 CDS
T05583
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_1686
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MicB006_1686
Archaeal homologous recombinant proteins
MicB006_1686
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Epimerase_2
YAcAr
Mre11_C_bact
PGA_cap
NonGDSL
Motif
Other DBs
NCBI-ProteinID:
AXO33981
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All DBs
Position
complement(1736857..1738005)
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AA seq
382 aa
AA seq
DB search
MKILHTSDWHVGKVLKGQSRAEEHKQVLAQVIEIAQRERPDLVIVAGDLYDTAAPTPEAT
RLVTRALTALRRTGADVVAIGGNHDNGAALDALRPWAEAAGITLRGSVRENPDEHVIDGV
TAGGERWRLAALPFLSQRYAVRAVEMYTLTPAEANQTYADHLGRVLDRLAEGFAEPDRVH
LVTAHLTVVGASTGGGERDAHTVLGYAVPATVFPGNAHYVALGHLHRSQRVIGPCPIRYS
GSPLAVDFGEQENVSSVTIVEVTATTAARIREVPVPDAVPLRTVRGTLAQLAEIEPPEGW
LRVYVREQPRAGLREEVQEMLPRALEIRIDPEMVPAPGSGTRTAQRAGRSPGELFGDYLD
SRGHADEGVRELFDELLEEVEH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgcacacctccgactggcacgtcggcaaggtcctcaaggggcagtcccgg
gccgaggagcacaagcaggtcctcgcccaggtgatcgagatcgcccagcgcgaacgcccc
gacctggtcatcgtggccggtgacctgtacgacaccgccgcgcccaccccggaggcgacg
cgcctggtcacccgggcgctcaccgcgctgcggcggaccggggccgacgtggtggcgatc
ggcggcaaccacgacaacggcgcggcgctggacgcgctgcgcccgtgggccgaggccgcc
gggatcacgctgcgcggcagcgtccgggagaaccccgacgagcacgtcatcgacggggtc
accgccggcggggagcgctggcggctggccgcgctgccgttcctgtcccagcggtacgcg
gtgcgcgcggtggagatgtacacgctcaccccggccgaggccaaccagacgtacgccgac
cacctgggccgggtgctggaccggctcgccgaggggttcgccgagccggaccgggtgcac
ctggtgaccgcgcacctcactgtggtcggcgcgagcaccggcggcggcgagcgggacgcg
cacacggtgctcgggtacgcggtcccggccaccgtcttccccggcaacgcgcactacgtg
gcgctgggtcacctgcaccgctcgcagcgggtcatcggcccctgcccgatccgctacagc
ggcagcccgctggctgtcgacttcggtgagcaggagaacgtcagctcggtgacgatcgtg
gaggtgacagcgaccaccgccgcccgcatccgggaggtgccggtgccggacgcggtgccg
ctgcgcacggtacgcggcacgctcgcgcagctcgccgagatcgagccgccggaggggtgg
ctgcgcgtctacgtccgggagcagccccgggccgggctgcgcgaggaggtgcaggagatg
ctgccccgggcgctggagatccggatcgacccggagatggtgcccgcgccgggcagcggg
acacgcaccgcccagcgggccgggcggtcgccgggcgagttgttcggcgactacctggac
agccgcgggcacgccgacgagggtgtccgggagctcttcgacgagctgctggaggaggtg
gagcactga
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