Micromonospora sp. B006: MicB006_3375
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Entry
MicB006_3375 CDS
T05583
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
micb
Micromonospora sp. B006
Pathway
micb03030
DNA replication
micb03410
Base excision repair
micb03420
Nucleotide excision repair
micb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MicB006_3375
03410 Base excision repair
MicB006_3375
03420 Nucleotide excision repair
MicB006_3375
03440 Homologous recombination
MicB006_3375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micb03032
]
MicB006_3375
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_3375
Enzymes [BR:
micb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MicB006_3375
DNA replication proteins [BR:
micb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MicB006_3375
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MicB006_3375
NER (nucleotide excision repair)
GGR (global genome repair) factors
MicB006_3375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
AXO35655
LinkDB
All DBs
Position
complement(3784751..3787375)
Genome browser
AA seq
874 aa
AA seq
DB search
MENFSTTTGQPTNAVYGFTSMLINVLRDEQPTHIVVAFDVSRRSFRTDKYAEYKAGRSET
PTDFKGQVSLVKEVLAALRVPVVEREGYEADDVIATLACQARDQGMDVLITTGDRDAFQL
VGERVTVLYPRKGVSDLARMDPAAVEAKYGVTPDRYRDLAALVGETSDNLPGVPGVGPKT
AAKWINLYDGVEGVVARADEIKGKAGDSLRERLADVIRNYEINRLVSDLELPVRPEDARW
QGWDREAVHQVFDTLQFRILRDRLYQYLEAVEPEAEAGFDLDGEVLTEPGALAGWLDTHA
PAGTPVGLAVTLDTGPNRRHTATVTAMALATAGGAGAWFDPSRLGADDEAALAGWLADAE
RPKVLHDSKPAVLAFAAHGWELQGIARDTQIAAYLARPDQRSYDLTDLALRYLHRELRVD
APETGQLTLDGLGDEGVAEQNLMLQARATLDLADAIDAELSRDGEQSARLMAGVELPLMR
VLATMERTGIAADTDYLSELEAHFAAEVKAAAQSAYEVVGREFNLGSPKQLQEILFTELG
LPKTKRIKTGYTTDADALQWLYAQTEHPLLHHLLRHRDVAKLKSTVDGLLKSVSDDGRIH
TTFNQTVAATGRLSSTEPNLQNIPIRTEEGRRIRRAFVVGEGYECLLTADYSQIEMRIMA
HLSSDDALIEAFNSGHDFHAATASSVFTVEVGDVTADQRRKIKAMNYGLAYGLSAFGLSQ
QLGISAEEARGLMENYFAGFGGVRDYLQEVVARARQDGYTSTILGRRRYLPDLVSDNRQR
REMAERMALNAPIQGSAADIIKVAMLHVDSALRDAGLRSRMLLQVHDELVFEVAPGERET
LEALVRKQMGEAYPLSVPLEVSVGEGRDWNSADH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaacttctccaccaccacggggcagccgaccaacgccgtctacggcttcacctcg
atgctgatcaacgtgctgcgcgacgagcagccgacgcacatcgtcgtggcgttcgacgtc
tcccgccgctccttccgcaccgacaagtacgccgagtacaaggccggccgcagcgagacc
ccgaccgacttcaagggccaggtcagcctggtcaaggaggtcctcgccgcgctgcgcgtg
ccggtggtcgagcgggagggctacgaggccgacgacgtgatcgcgacgctcgcctgccag
gcccgcgaccagggcatggacgtgctgatcaccaccggcgaccgggacgcgttccagctc
gtcggcgagcgggtcactgtgctctacccgcgcaagggcgtctccgacctggcccggatg
gacccggccgcggtggaggcgaagtacggcgtcaccccggaccgctaccgcgacctggcc
gcgctggtcggcgagaccagcgacaacctgcccggcgtgcccggcgtcggcccgaagacc
gcggccaagtggatcaacctgtacgacggcgtcgagggcgtggtggcccgcgccgacgag
atcaagggcaaggccggcgacagtctgcgcgagcggctggccgacgtgatccgcaactac
gagatcaaccgtctggtctccgacctggagctgccggtccgccccgaggacgcccgctgg
cagggctgggaccgcgaagcggtgcaccaggtcttcgacacgctccagttccgcatcctg
cgcgaccggctctaccaatacctggaggcggtcgagccggaggccgaggcgggcttcgac
ctcgacggcgaggtgctcaccgagccgggcgcgctcgcgggctggctcgacacgcacgcc
ccggcgggcacgccggtgggcctggcggtcacgctcgacaccggcccgaaccgccggcac
accgccaccgtgaccgcgatggcgctggccaccgccggcggcgcgggcgcctggttcgac
ccgagccggctgggcgcggacgacgaggccgcgctggccgggtggctggccgacgccgag
cgcccgaaggtgctgcacgacagcaagccggcggtgctggcgttcgccgcgcacggctgg
gagctgcagggcatcgcccgcgacacccagatcgccgcctacctggcccgccccgaccag
cgctcctacgacctgaccgacctggctctgcgctacctgcaccgggagctgcgcgtcgac
gcgccggagaccggtcagctcaccctcgacgggctcggcgacgagggcgtggccgagcag
aacctcatgctccaggcccgcgccacgctcgacctggccgacgcgatcgacgccgagctg
tcccgcgacggcgaacagtcggcccggctgatggccggcgtggaactgccgctgatgcgg
gtgctcgccaccatggagcgcaccggcatcgccgccgacaccgactacctctccgagctg
gaggcacacttcgccgccgaggtgaaggccgccgcccagagcgcgtacgaggtggtcggt
cgcgagttcaacctgggctcgccgaagcagttgcaggagatcctcttcaccgagctgggc
ctgcccaagaccaagcggatcaagaccggctacaccaccgacgccgacgcgctccagtgg
ctctacgcgcagaccgagcacccgctgctgcaccacctgctgcgccaccgcgacgtcgcg
aagctcaagtcgacagtcgacggtctgctcaagtcggtctccgacgacggccggatccac
accacgttcaaccagacggtggcggcgaccggtcggctgtcctccaccgagccgaacctg
cagaacatcccgatccgcaccgaggaggggcggcggatccggcgcgcgttcgtcgtcggc
gagggctacgagtgcctgctcaccgccgactacagccagatcgagatgcggatcatggcg
cacctgtcctcggacgacgcgctgatcgaggcgttcaactcggggcacgacttccacgcc
gccaccgcgtcctccgtcttcaccgtcgaggtcggcgacgtcaccgccgaccagcgccgc
aagatcaaggcgatgaactacggcctggcctacgggctcagcgcgttcggcctgtcccag
cagctcggcatctccgccgaggaggcgcgcgggctgatggagaactacttcgccgggttc
ggcggggtccgcgactacctccaggaggtggtggcccgcgcccgccaggacggctacacc
tccaccatcctgggccgccgccgctacctgcccgacctggtcagcgacaaccggcagcgc
cgcgagatggccgagcggatggcgctcaacgccccgatccagggctcggcggccgacatc
atcaaggtcgcgatgctgcacgtcgacagcgcgctgcgcgacgccgggctgcggtcgcgg
atgctgttgcaggtgcacgacgagctggtcttcgaggtcgcgccgggcgagcgggagacg
ctggaggcgctggtgcgcaagcagatgggtgaggcgtacccgctgtcggtgccgctggag
gtgtcggtgggcgagggccgcgactggaacagcgccgaccactga
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