Micromonospora sp. B006: MicB006_3557
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Entry
MicB006_3557 CDS
T05583
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
micb
Micromonospora sp. B006
Pathway
micb03030
DNA replication
micb03430
Mismatch repair
micb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MicB006_3557
03430 Mismatch repair
MicB006_3557
03440 Homologous recombination
MicB006_3557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micb03032
]
MicB006_3557
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_3557
Enzymes [BR:
micb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MicB006_3557
DNA replication proteins [BR:
micb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MicB006_3557
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MicB006_3557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AXO35836
LinkDB
All DBs
Position
3982301..3984058
Genome browser
AA seq
585 aa
AA seq
DB search
MTRAEYVQESLAGLDTAAGSAVDPALPLYATTFVVVDLETTGGAPDGGGITEIGAVKVRG
GEELGVLATLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSFLEFISDAVLVAHNAP
YDVGFLKAACAKHGYRWPNPRVLDTAALARRVLTRDEVPNRKLGTLAAYFRTATQPTHRA
LDDAKATVDVLHGLIGRLGGHRVDTVGDAIEFARAVTPTQRRKRHLADGLPKVPGVYIFR
AADDRPLYVGTSGDVATRVRSYFTAAEKRARISEMLAAAERVEAIECAHSLEAEVRELRL
IAAHAPPYNRRSKYPERQVWLKLTDEAYPRLSIVRDIAPTDTAYLGPFRSRQAAELAAAG
FHDAVPLRQCTHRLSRRTTMPACALAELGRCPAPCEHRITPEEYDDAAATPFRTATSDDP
GVVVDALLDRIEVLSAAQRYEEAAVVRGRLVAVLRAAVRMQRLAALTGIAELAAARPAAR
GGWELALVRHGRLAGAGVSPPGVHPRPTIAAIRATAETVLPGHGPVPSATAEETERILSW
LERPETRLVEASAGWASPVAGAGRFRDLLAKAESGGSHKVSTERS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgacacgagcggagtacgtccaggagtcgctggccggcctggacactgcggcgggcagc
gccgtggacccggcgctgccgctctacgcgaccaccttcgtggtggtcgacctggagacc
acgggcggcgcgcccgacggcggcgggatcaccgagatcggcgcggtgaaggtgcgcggc
ggcgaggagctgggcgtgctcgccacgctggtcaacccgggcgtgccgatcccgccgttc
atcaccgtgctgaccggcatcacgcaggccatgctgctgcccgccccgccgatcgagcag
gtgctgccgagcttcctggagttcatcagcgacgccgtgctggtcgcccacaacgcgccg
tacgacgtggggttcctcaaggccgcctgcgcgaagcacggctaccgctggcccaacccc
cgggtgctggacacggccgcgctggcccggcgggtgctcacccgcgacgaggtgcccaac
cgcaagctgggcacgctggccgcctacttccgcaccgcgacccagcccacccaccgggcg
ctggacgacgccaaggccaccgtcgacgtgctgcacgggctgatcgggcggctcggcggg
caccgggtcgacaccgtcggcgacgcgatcgagttcgcccgcgcggtcacccccacccag
cgccgcaagcggcacctcgccgacgggctgcccaaggtgccgggcgtctacatcttccgg
gccgccgacgaccggccgctctacgtcggcacctccggcgacgtcgccacccgggtacgc
agctacttcaccgcagcggagaagcgggcccggatctccgagatgctcgccgccgccgag
cgcgtggaggcgatcgagtgcgcccactcgctggaggcggaggtccgcgagctgcggctg
atcgcggcgcacgcgccgccgtacaaccgccggtcgaagtatccggagcgccaggtgtgg
ctgaagctcaccgacgaggcgtacccccggttgtcgatcgtgcgcgacatcgcgccgacc
gacacggcctacctggggccgttccggtcccggcaggcggccgagctggccgccgccggt
ttccacgacgcggtgccgctgcgccagtgcacccaccggctgtcccggcgcacgaccatg
ccggcctgcgcgctggccgagctgggtcgctgcccggcgccctgcgagcaccggatcacc
cccgaggagtacgacgacgcagcggcgaccccgttccgcaccgccaccagcgacgacccc
ggtgtggtggtggacgcgctgctcgaccgcatcgaggtgctgtcggccgcccagcgctac
gaggaggcggctgtggtacgcggccgactcgtggcggtgctgcgcgcggcggtccggatg
cagcggctggccgcgctgaccggcatcgccgagctggccgccgcccgcccggcggcccgg
ggcggctgggagctggcgctggtccggcacggccggctggcgggggccggggtgtccccg
ccgggtgtccacccgcgaccgacgatcgccgcgatccgggccaccgccgagacggtcctg
ccggggcacgggccggtgccgtccgcgaccgccgaggagaccgaacggatcctgtcctgg
ttggagcgaccggagacccgcctggtcgaggcgagcgccggatgggcctcgccggtggcc
ggggcggggcgtttccgtgacctgctggcgaaggcggagagcggcggatcgcacaaagtc
tcgaccgaacgctcatga
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