Micromonospora sp. B006: MicB006_5128
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Entry
MicB006_5128 CDS
T05583
Name
(GenBank) topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micb03032
]
MicB006_5128
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_5128
Enzymes [BR:
micb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MicB006_5128
DNA replication proteins [BR:
micb03032
]
Prokaryotic type
DNA Topoisomerases
MicB006_5128
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MicB006_5128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
LAGLIDADG_3
DNA_gyraseA_C
Intein_splicing
WhiA_N
Motif
Other DBs
NCBI-ProteinID:
AXO37390
LinkDB
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Position
5707638..5711414
Genome browser
AA seq
1258 aa
AA seq
DB search
MARRKDDRAKADLAAFDQAGARVFDNPLVTEVSDSYLEYAFSVIHSRALPDARDGLKPVH
RRILWSMYEQGYRPDRGHVKSARIVGDAMGKYHPHGDTAIYDAMVRLAQDFSLNVPLIDG
HGNFGSPDDGPAAARYCVVGDTRIRLADGSSPRIGDVAGLPPNSEAEADFEVLDKDGKAV
RVNKVFNSGVHPTLRITTETGFSLRGSENHLVLCLEAPMGVPVFQWRRLDEVTPGSVVCV
ARNAWNQVVPTAREYMLGVLGGAWVSEGFASESRAGFSNTDEHFFGEVLHAYDQVVGGRR
YVSDRHTRRDRRRIHELDVQDVAGGMEAFRASPLAELIGHQARDKFVPEFVWAGGWGIKR
AFLMALFEGDGGVRVANSSFTIQYTSYSERLTREVQELLAEFGVIACRRHYTRPSGSVEH
RLVVSGTRNIRAFATRVGFLRTKQAVLAKMLRHAPLRSHRLSQDHVPFVADYVRSSIDFD
RRGSGRKWLTSHNFDRVERWETERLRIIDRIKDTEVLATILPVMDAGYRYEKVVAVSPDE
PAEVYSVRVESADHSFLAGGFVNHNTEARMSREAMLLTGELGEDTVDFEPNYDGSLTQPT
VLPAAFPNLLVNGASGIAVGMATNMIPHNLGEVVQAARWLINHPDATLDKLMEFVPGPDL
PTGGLLLGLDEVRRAYETGRGVVRMRGRVEIGPLEGSRGRQAITVTELPYGVGAEKVIAA
ITNEVNKTKRLTGIADVKDLTDRENGTRLVVECKVGVNPQALLADLYRLTPLEQSFGVNN
LVLVDGQPRTLGLKELLDVFLAHRYEVVTRRTAYRKRKREERLHLVDGLLIALLDIDRVV
KLIRASEDAQAAKDGLMQKFKLSEIQAAYILDTPLRRLTKYDRLELEAEQEKLRGEIAEL
SKILDDPKVLRKVVSDELAAVVKQFGAPRRTTLVDGDLKEVLAASVPAGPLEVADDPCQV
ILSATGLVARTAAESEEAAEARRRSGRVKHDAVRAVVHSTARGRVLLVTSAGRAFKIDVL
PLPVLPEQSGTVSLRGGMSAAELAPLEPGETVVGLVPLGPSAQGSPGLALGTRAGVVKVC
APDWPVRSDEFEVISLRDGDEVIGATWLTDGAETLAFVSSEASLLRFAASVVRPQGLKGG
GMSGINLPAGARAVFFGAIRTDDAKHGEPMVVTSTGATVKVTPFKAYPAKGRATGGVRAQ
RFLKGELELSVAWIGPRPVGATATGDPVDLPPADPRRDGSGFAVMLGPTVVGHHIDRD
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaaggacgaccgcgcgaaggcggatctggccgccttcgaccaggccggc
gcccgggtcttcgacaacccgctggtcaccgaggtctcggactcctatctggagtacgcg
ttctcggtcatccactcccgagccctgcccgacgcgcgcgacgggctcaagccggtgcac
cggcgcatcctgtggtcgatgtacgagcagggctaccggccggaccggggccacgtcaag
agcgcccgcatcgtcggcgacgcaatgggcaagtaccacccgcacggcgacaccgccatc
tacgacgcgatggtacggctggcccaggacttctcgctcaacgtcccgctcatcgacggg
cacggcaacttcggctcgccggacgacggcccggccgcggcgcgctactgcgtcgtgggt
gacacccggatccgcctggccgatggcagcagcccacggatcggtgatgtggccggcctg
ccgccgaacagcgaggcggaggccgatttcgaagtcctcgacaaggacggcaaagcggtt
cgcgtcaacaaggtcttcaactcgggcgtccacccgacgctccggatcacgactgagacc
ggattctccctccgtggtagtgagaatcatctggttctctgcctcgaagctccgatgggc
gtccctgtcttccagtggcgtcggctcgatgaggtgacgccgggctcggtggtctgtgtc
gcgcggaacgcatggaaccaggtcgtccccaccgctcgcgaatacatgctcggcgtgctc
ggtggcgcctgggtctctgaaggcttcgcgagcgagtcgcgggcaggattcagcaatacc
gatgagcatttcttcggcgaggtcctgcatgcctacgaccaggtcgtgggtggacgacgc
tacgtcagcgaccggcacacgcgccgagaccgtcgccgcatacacgaacttgacgtccag
gacgtcgccggcgggatggaagccttccgggcgagtccactcgccgagctgatcggtcac
caggcgagggacaagttcgtgccggagttcgtgtgggcaggggggtggggtatcaagcgg
gccttcctgatggccctcttcgaaggcgacggcggagtccgcgtcgccaacagcagcttc
accatccagtacaccagctacagcgagcgtctgactcgggaggtccaagaactgctcgcg
gagttcggcgtgatcgcctgtcggcgccactacacccggcccagtggctcggtggagcac
cgcttggtggtttccgggacgcgaaacatcagggctttcgcaactcgtgtcggcttcctc
cgtaccaagcaggcggtgctggccaagatgctgcggcatgcgccgctgcgttcgcaccgg
ctcagtcaggaccacgtcccctttgtggccgactacgtgcgcagcagcatcgacttcgat
cgtcggggcagcggacgcaagtggctcaccagccacaacttcgatcgtgtcgagcggtgg
gaaaccgaacgactccgcatcatcgaccgcatcaaggacaccgaagtcctcgccacgatc
ctgcccgtgatggatgcgggctatcggtacgagaaggtcgtcgcggtctcgcccgacgag
ccggcggaggtctattccgttcgagtggaatccgccgaccactccttcctggccggtggc
ttcgtcaaccacaacaccgaggcgcggatgtcccgggaggcgatgctgctcaccggcgag
ctgggtgaggacacagtcgatttcgagccgaactacgacggctcgctgacccagcccacg
gtgctgccggcggcgttcccgaacctgctggtcaacggcgcatcaggcatcgcggtcggc
atggccaccaacatgatcccgcacaacctcggcgaggtggtccaggccgcccgctggctg
atcaaccacccggacgccacgctggacaagctcatggagttcgtccccggccccgacctg
cccaccggcgggctgctgctcggcctggacgaggtgcgccgcgcgtacgagaccgggcgc
ggcgtggtgcgcatgcgcgggcgggtggagatcggcccgctggagggcagccgcggccgg
caggccatcaccgtcaccgagctgccgtacggcgtcggcgccgagaaggtcatcgcggcc
atcaccaacgaggtgaacaagaccaagcggctgaccggcatcgccgacgtcaaggacctc
accgaccgggagaacggcacccgcctggtggtggagtgcaaggtcggcgtgaacccgcag
gccctgctggccgacctctaccggctcaccccgctggagcagtccttcggcgtgaacaac
ctggtgctcgtcgacggtcagccgcgcacgctcgggctcaaggagctgctcgacgtgttc
ctggcgcaccgctacgaggtggtgacccgccgcaccgcgtaccgcaagcgcaagcgggag
gaacgcctgcacctggtcgacggtctcctgatcgccctgctcgacatcgaccgggtggtc
aagctgatccgcgccagcgaggacgcccaggccgccaaggacggcctgatgcagaagttc
aagctctccgagatccaggccgcgtacatcctggacaccccgctgcgccgcctgaccaag
tacgaccggctggagctggaggccgagcaggagaagctgcgcggcgagatcgccgagctg
tcgaagatcctggacgaccccaaggtgctgcggaaggtggtctccgacgagctggccgcc
gtggtgaagcagttcggcgcgccgcggcgcaccacgctcgtcgacggtgacctcaaggag
gtgctcgccgcctcggtgccggccggcccgctggaggtggccgacgacccgtgccaggtg
atcctctccgccaccgggctggtcgcgcggaccgcggccgagtcggaggaggccgccgag
gcgcgccggcgcagcggccgggtcaagcacgacgcggtacgcgcggtggtgcactccacc
gcacggggacgcgtgctgctggtgaccagcgccggtcgcgccttcaagatcgacgtgctg
ccgctgccggtgctgcccgagcagtccggcacggtgtcgctgcgcggcggcatgtcggcg
gcggaactggcgccgctggagccgggcgagacagtcgtcggcctggtcccgctggggccg
tccgcgcaggggtcgcccgggctggcgctcggtacccgggcgggcgtggtcaaggtgtgc
gcgccggactggccggtccgctccgacgagttcgaggtgatctcgttgcgtgacggcgac
gaggtgatcggcgcgacgtggctgaccgacggcgccgagacactggcgttcgtctcctcg
gaggcgtcgctgctgcgcttcgccgcatcggtggtacgcccgcaggggctcaagggcggc
ggcatgtccggcatcaacctgcccgccggggcgcgagcggtgttcttcggcgcgatccgc
accgacgacgcgaagcacggtgagccgatggtggtcacgtcgaccggcgccacggtgaag
gtgacgccgttcaaggcgtacccggcgaaggggagagcgaccggcggcgtacgcgcgcag
cggttcctcaagggtgagctggagctgtcggtggcctggatcggcccgcggccggtgggc
gcgaccgcgaccggcgacccggtggacctgccgcctgccgacccgcgccgggacggctcc
ggcttcgccgtgatgctcggccccaccgtggtgggccaccacatcgaccgcgactga
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