Micromonospora sp. B006: MicB006_5258
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Entry
MicB006_5258 CDS
T05583
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micb03021
]
MicB006_5258
Transcription machinery [BR:
micb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MicB006_5258
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
HTH_23
MarR_2
HTH_3
GerE
Sigma70_ECF
DUF7343
HTH_10
HTH_24
NirdL-like_HTH
DUF134
HTH_31
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AXO37520
LinkDB
All DBs
Position
complement(5860901..5861722)
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AA seq
273 aa
AA seq
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MTAPTISAPATTPAGSAKLDPRSLTDSAADLLDAMAALPADHPSRPALRDRAIEAWLPLA
NHLAHRYSGRGEPNDDLAQTAAIGLIKAIDKFDPSRGVDFAGYAIPTIIGELKRHFRDRT
WDIRVPRRLQELRLAISDANSTLLQTLGRSPTVADIAAHLKLTEEEVLEGLEGARAYNAV
SLSTPTGDGERATELGDLIGGEDGEFELAEMRVALGPALATLDQREQKILTLRFYGNLTQ
SQIAEQIGVSQMHVSRLLARALTKLRGQLDGTY
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccacgatcagcgccccggcgaccacgccggccggctccgcgaagctcgac
ccccgctcgctcaccgacagcgccgccgacctgctcgacgcgatggccgcgctgccggcc
gaccacccgtcgcggcccgcgctgcgcgaccgcgccatcgaggcctggctgccgctggcg
aaccacctggcccaccgctacagcggtcgcggcgagccgaacgacgacctggcgcagacc
gccgcgatcggcctgatcaaggcgatcgacaagttcgacccgtcgcgcggcgtcgacttc
gccggctacgcgatccccaccatcatcggcgagctgaagcgccacttccgcgaccgcacc
tgggacatccgcgtcccccgccggctgcaggagctgcgcctggccatctccgacgccaac
agcacgctgctgcagacgctcggccgctcgccgacggtcgccgacatcgccgcccacctc
aagctcaccgaggaagaggtgctggagggcctggagggcgcccgcgcgtacaacgcggtg
tcgctgtccaccccgaccggtgacggcgagcgcgccaccgagctcggcgacctgatcggc
ggcgaggacggcgagttcgagctggccgagatgcgggtggccctcggcccggcgctggcc
acgctcgaccagcgcgagcagaagatcctcacgctgcgcttctacggcaacctgactcag
tcgcagatcgccgagcagatcggcgtctcgcagatgcacgtgtcccggctgctggcccgg
gccctgaccaagctgcgcgggcagctcgacggaacgtactag
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