Micromonospora sp. B006: MicB006_5292
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Entry
MicB006_5292 CDS
T05583
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micb03032
]
MicB006_5292
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_5292
Enzymes [BR:
micb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MicB006_5292
DNA replication proteins [BR:
micb03032
]
Prokaryotic type
DNA Topoisomerases
MicB006_5292
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MicB006_5292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Glyco_hydro_19
Motif
Other DBs
NCBI-ProteinID:
AXO37554
LinkDB
All DBs
Position
5894225..5895214
Genome browser
AA seq
329 aa
AA seq
DB search
MRLRRSDPGRPGYARRRRGKGWLFLDPAGEPVRDAGELARLRELVIPPAWQDVWISPYPN
GHIQAIGIDAAGRKQYLYHPHWRRKRDEAKFDHVLEVAHRLPALRDRVTHDLTLRGLRRE
RVLATVARLLDMGAFRVGSDQYATGDDPTFGVATLRPEHTRPRGGCVVLEFPAKGGIEQV
RRIEDAELCRVLLNLRRRRRAQERLFGYWDGRSWRDVRSDEVNDYLRDASGGEMTAKDFR
TWHATVLAAAELATVGPQRSATARRRAVAAVMRSVAELLGNTPTVARASYVDPRVVDLYH
GGVLAPVQPEMPREAVEKSVLALLEEEAG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttgcggcgtagcgatccgggccggccggggtacgcgcgccggcggcggggcaag
ggctggctgttcctcgacccggccggcgagccggtgcgcgacgccggggagctggcccgg
ctgcgggagctggtcatcccgccggcctggcaggacgtgtggatctcgccgtacccgaac
ggccacatccaggccatcggcatcgacgcggcgggccgcaagcagtacctctaccacccg
cactggcggcgcaagcgcgacgaggcgaagttcgaccacgtgctggaggtggcgcaccgg
ctgcccgcgctgcgggaccgggtcacgcacgacctgacgctgcgcggcctgcgccgggag
cgggtgctggccaccgtcgcccggctgctcgacatgggcgccttccgggtcggcagcgac
cagtacgccaccggcgacgacccgaccttcggggtggccacgctgcgccccgagcacacc
cgcccccggggcgggtgcgtggtcctggagttccccgccaagggcggcatcgagcaggtc
cgccggatcgaggacgcggagctgtgccgggtgctgctcaacctgcgccggcgacggcgg
gcccaggagcggctgttcggctactgggacggccggtcctggcgcgacgtgcgcagcgac
gaggtgaacgactacctccgcgacgccagcggcggggagatgaccgcgaaggacttccgc
acctggcacgccacggtgctggccgcggccgaactggccactgtgggcccgcagcgctcc
gccaccgcccgcaggcgcgcggtggcggcggtgatgcgttcggtggccgagctgctcggc
aacaccccgacggtggcgcgggcctcctacgtggacccgcgggtggtggacctctaccac
ggcggggtgctggcgccggtgcagccggagatgccgcgcgaggcggtggagaagtccgtg
ctggcgctgctggaggaggaggccggctga
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integrated database retrieval system
