Micromonospora sp. B006: MicB006_5295
Help
Entry
MicB006_5295 CDS
T05583
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
micb
Micromonospora sp. B006
Pathway
micb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MicB006_5295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micb03019
]
MicB006_5295
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_5295
Enzymes [BR:
micb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MicB006_5295
Messenger RNA biogenesis [BR:
micb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MicB006_5295
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MicB006_5295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
HEM4
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AXO37557
LinkDB
All DBs
Position
complement(5897127..5898758)
Genome browser
AA seq
543 aa
AA seq
DB search
MKLTTHSSSLRRAARNLFGWTALRPNQLAAMRAVMKRRDALVVLPTGAGKSAIYQIPASL
IPGPTVVISPLLALQQDQIAALNERQRPELRAVRISSDESAAQQAEAIEDIRAGRAEFLF
ITPEALSNPDRLAEVRELKPALVAIDEAHCISAWGHDFRPDYLALGHLIDGLGRPPVVAL
TATASPPVRDDIIARLRLREPEVVVSGLDRPNLFLEVAHCPTDDYRWRRLIALLRDDERP
GIIYVPTRRAAEELAERLTGAGFPAEFYHGGMPTAARHELHEAFLADRVPIMVATSAFGM
GIDKPNIAWVVHMALPDSPDSYFQEIGRAGRDGSPARVLLLWRAEDVGLQRYFSGGLPDE
KELAELAAVLRGKARNRKELRELTGLGPRKLGQYLSLLEQIGAAEPRAGQRIGAPRYAPE
AAESGRAALAEAERQQTVTRSRTDMMRAFAETTGCRGQALLAYFGEQMQKVCGHCDNCHA
GTSVAADGAVGPFPVHSQVRHPEWGAGLVLSYEEDRMTVLFDEVGYKTLSVPVVSEQGLL
ELD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccacgcactcctccagcctgcgccgggcggcgcggaacctgttcggctgg
accgcgctgcggcccaaccagctcgccgccatgcgcgccgtcatgaagcgccgcgacgcc
ctggtggtgctgcccaccggcgccggcaagtcggcgatctaccagatcccggccagcctg
atcccgggcccgacggtggtgatctccccgctgctggcgttgcagcaggaccagatcgcc
gcgctcaacgaacggcagcgtccggagctgcgcgcggtgcggatcagctcggacgagagc
gccgcccagcaggccgaggcgatcgaggacatccgggccgggcgcgcggagttcctgttc
atcacgccggaggcgctgagcaacccggaccggctcgccgaggtccgtgagctgaagccg
gcgctggtggcgatcgacgaggcgcactgcatctccgcctggggccacgacttccggccg
gactacctggcgctgggccacctgatcgacggcctgggccgaccgccggtggtggcgctc
accgccaccgcctccccgccggtacgcgacgacatcatcgcccggctgcggctgcgcgag
cccgaggtggtggtctccgggctggaccggccgaacctcttcctggaggtggcccactgc
cccaccgacgactaccggtggcggcggctgatcgcgctgctgcgtgacgacgagcggccc
ggcatcatctacgtgccgacccgccgggcggccgaggagctggccgagcggctcaccggc
gccggtttcccggccgagttctaccacggcggcatgcccacggcggcccggcacgagctg
cacgaggcgttcctcgccgaccgggtgccgatcatggtggccacgtcggcgttcggcatg
ggcatcgacaagccgaacatcgcctgggtggtgcacatggcgctgcccgactcgccggac
agctacttccaggagatcggccgcgccgggcgcgacgggtcgccggcccgggtgctgctg
ctgtggcgcgccgaggacgtcggcctgcagcgctacttcagcggcggactgccggacgag
aaggaactggccgaactggccgcggtgctgcgcggcaaggcccgcaaccgcaaggagctg
cgcgagctgaccggcctcggtccgcgcaagctgggccagtacctgtccctgctggagcag
atcggcgccgccgagccgcgggccgggcagcgcatcggcgcgccccggtacgcgccggag
gccgccgagtcgggccgcgcggcgctcgccgaggcggaacggcagcagacagtgacccgc
tcgcgtaccgacatgatgcgcgccttcgccgagaccaccggctgccgcggccaggccctg
ctggcgtacttcggcgagcagatgcagaaggtctgcgggcactgcgacaactgccacgcc
ggcaccagcgtggccgccgacggcgcggtcggtccgttccccgtgcacagccaggtgcgc
cacccggagtggggcgccggcctggtgctcagctacgaggaggaccggatgacggtgctc
ttcgacgaggtcggctacaagacgctctccgtgccagtggtgtccgaacagggactgctg
gaactcgactag
DBGET
integrated database retrieval system
