Micromonospora sp. B006: MicB006_5358
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Entry
MicB006_5358 CDS
T05583
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
micb
Micromonospora sp. B006
Pathway
micb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MicB006_5358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_5358
Enzymes [BR:
micb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MicB006_5358
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MicB006_5358
RecFOR pathway proteins
MicB006_5358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_16
AAA_5
AAA_22
Mg_chelatase
AAA_14
NTPase_1
nSTAND3
AAA_18
AAA_3
TsaE
RNA_helicase
TIP49
Zeta_toxin
AAA_33
AAA_25
AAA_28
Rad17
IstB_IS21
AAA_19
AAA_17
NPHP3_N
NB-ARC
NACHT
ABC_tran
DUF815
Motif
Other DBs
NCBI-ProteinID:
AXO37620
LinkDB
All DBs
Position
5958732..5959796
Genome browser
AA seq
354 aa
AA seq
DB search
MTGENLVSAYVSDAERDAEASVRPKRLDEFIAQHRVRDQLDLLLQGAMRRGSPPDHILLS
GPPGLGKTTLANIVAAELGAGIRVTSGPAIERSGDLAAILTSLAEGDVLFIDEIHRIAKP
AEELLYSAMEDFRVDVVVGKGPGATAIPLDVEPFTLVGATTRSGLLTGPMRDRFGFVAHL
DFYAPADLETLLHRSARILGVPITADGAAEIAGRSRGTPRIANRLLRRVRDYAEVRAEGV
VTLETARAALTVYDVDALGLDRLDRAVLTALVDSFRGGPVGLSTLAVAVGEQPDTVEEVC
EPFLVRAGLLARTPRGRVATEAAWHHLGRNPPNGTFGADTSPGPDLFSVQTDQP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgagaacctggtctcggcgtacgtcagcgacgccgagcgggacgcggaggcg
agcgtccgcccgaagcggctcgacgagttcatcgcccagcaccgcgtccgcgaccagctc
gacctgctgttgcagggcgcgatgcggcgtggctcgccgcccgaccacatcctgctgtcc
gggccgcccggcctcggcaagacgacactggccaacatcgtcgccgccgagctgggagcg
gggatccgggtgaccagtggcccggccatcgagcgctccggcgacctggccgcgatcctg
accagcctcgccgagggcgacgtgctgttcatcgacgagatccaccggatcgccaagccg
gccgaggaactgctctacagcgccatggaggacttccgcgtcgacgtggtggtgggcaag
gggccgggcgcgacagccatcccgctcgacgtggagccgttcacgctcgtcggcgccacc
acccgctccggcctgctgaccgggccgatgcgcgaccgcttcggcttcgtcgcgcatctc
gacttctacgcgccggccgacctggagacgctgctgcaccggtcggcccggatcctcggt
gtgccgatcacggccgacggcgcggcggagatcgccggccggtcccggggcaccccgcgc
atcgccaaccggctgctgcgccgggtgcgcgactacgccgaggtgcgggccgagggcgtg
gtcacgctggagaccgcgcgggcggcgctgaccgtctacgacgtggacgcgctcggcctg
gaccggctcgaccgggcggtgctcaccgcgctcgtcgactcgttccggggcggcccggtg
ggcctgtccacgctggcggtcgcggtgggggagcagccggacacggtcgaggaggtctgc
gagccgttcctggtgcgggccggcctgctggcgcgtacgccgcgcgggcgggtggcgacg
gaggccgcttggcaccatctgggtcgcaacccgccgaatggtacatttggtgcggatacc
tctccggggcccgatctcttctcggtgcagaccgaccagccgtga
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