Micromonospora sp. B006: MicB006_5580
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Entry
MicB006_5580 CDS
T05583
Name
(GenBank) very-short-patch mismatch repair endonuclease (G-T specific)
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_5580
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
MicB006_5580
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Paralog
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GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
CcmS
Motif
Other DBs
NCBI-ProteinID:
AXO37838
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All DBs
Position
complement(6210625..6211065)
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AA seq
146 aa
AA seq
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MTGRPTALNAAVSAQMSRMPRSRTKPEMSVRRELHRRGLRFRANHPGLPGRPDIAFTRAR
LAVFVDGCFWHLCPEHAVLPKNNATWWREKLERNVLRDREKDEALTALGWTVLHFWEHED
PVAVADVVEQLWRERCRSGTTAWAVG
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgacgggacgtcccaccgctctcaacgccgccgtgtcggcgcagatgagccggatgccg
cggtcgcggacgaagcctgagatgtcggtacgacgtgagctgcaccgacgggggctacgg
ttcagggcgaaccatcccggtctgcccggccgaccggacatcgccttcacacgggcacgt
ctggccgtgttcgtcgacggatgcttctggcacctgtgccccgagcatgcggtgctgccg
aagaacaacgccacgtggtggcgggagaaactggaacgtaacgtgctgcgtgaccgcgag
aaggacgaggccctgacagcactcggctggacggtgctgcacttctgggagcacgaggat
cccgtggccgttgcggatgtcgtcgagcagctctggcgggaacggtgccgatccgggacc
acagcgtgggcggtcgggtga
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