Micromonospora sp. B006: MicB006_5980
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Entry
MicB006_5980 CDS
T05583
Name
(GenBank) putative RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
micb
Micromonospora sp. B006
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micb03021
]
MicB006_5980
Transcription machinery [BR:
micb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MicB006_5980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
STAS_2
Sigma70_r3
STAS
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Tnp_4
MarR_2
HTH_28
DUF7343
HTH_24
MarR
HTH_Crp_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AXO38238
LinkDB
All DBs
Position
6684556..6685689
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AA seq
377 aa
AA seq
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MFGQTTTPTPPTTDRGLEDLDAAALAYAARIEGLPPERRQEARDDLVRFALPFAGRLARR
YRGRGEPLEDLEQVARLGLVNAVDRYDPERGSFTAYAAITIVGEIKRHFRDRTWGVHVPR
RLRDLILEVGQATATLTSELSRAPTVAELSARLETPEEEILAALESAAGYSPASLNAPVG
GESSAEFGDLVGESDHALESVDDRVTVSGLLHRLPWRERRILAMRFYGNQTQAEIAARFG
ISQMHVSRLLSRALTWLRQAMLAEAPPPWQNGAAEAEPAKARISVKQNGDRVVVEVGGEV
DRAGADQLRRAVLKAVTGQPREVVVDLVGAGGFDAGGIAALMAGRDAAARTGVPLRLTRV
QPAVRRSLTAAGLPAAD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttcggacagaccaccacacccacaccaccgaccaccgaccggggcctggaggacctg
gacgccgcggcgctcgcgtacgcggcccggatcgagggactgccaccggaacggcggcag
gaggcgcgggacgacctggtccggttcgcgttgccgttcgccggccggctggcccggcgc
taccggggacgcggcgaaccgctggaggacctggagcaggtggcccgcctcgggctggtc
aacgccgtcgacaggtacgacccggaacggggatcgttcaccgcgtacgcggcgatcacc
atcgtcggcgagatcaaacggcacttccgcgaccgcacctggggcgtgcacgtgccacgc
cggctgcgggacctgatcctggaggtcgggcaggcgacggcgacgctcaccagcgagctg
tcccgcgcccccacggtggcggagctgtccgcccggctggagacgccggaggaggagatc
ctggccgcgctggagtcggccgccggctacagcccggcgtcgctcaacgcgcccgtcggc
ggggagagctccgccgagttcggtgacctggtcggcgagtccgaccacgcgctggagtcg
gtggacgaccgggtgactgtgagcggcctgctgcaccggctgccctggcgggaacgccgc
atcctggcgatgcgcttctacggcaaccagacccaggcggagatcgccgcccggttcggc
atctcgcagatgcacgtgtcccggctgctgtcgcgggcgctgacctggctgcgccaggcg
atgctggccgaagcgccgccgccctggcagaacggcgccgccgaggccgagccggcgaag
gcccgcatctcggtgaagcagaacggcgaccgggtggtcgtcgaggtcggcggcgaggtc
gaccgggccggcgcggaccagctgcgccgggccgtgctcaaggcggtcaccgggcagcca
cgcgaggtcgtggtggacctggtcggggcgggcggcttcgacgccggcgggatcgccgcg
ctgatggccggccgggacgccgccgcgcgtaccggggtgccgctgcggctgacccgggtg
cagccggcggtgcgccgctcgctgaccgctgccggactgccggccgccgactga
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